Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1923 ATGCGTGAGACACCCAAACCGTTACATCCATCTTCCACACTTTCCAGTCAGGAATTTCAGCCGCTGTCACGAACTGAAAGGACGATGTTGAGAAACGAAAGTGTGGGTTCCAGCAGCGCTAGGCATAGTGCCACCGTTTCTACGGTATCCAATAAAGTTCTGGTGGCCGTGAAGGCGGAAAGGGTGATCTCCAAGAACGCATTAGCCTGGGCACTCACTCATGTCGTTCACTCTTCTGATTGCATCACCCTGCTCGCTGTGTACTGTGGCGAGAAAACTGGCAGAAGATTCTGGAATTTTTTGAGATTGGCCGGAGATTGTACAAACGGACGCCGGGAAAAGTTGCCGGAGCGGATTTGTGAAATCTCCGAGTCTTGTTCTCAGATGGTACTTCAATTGAACGATCAAATTGAGGTTAGGGTGAAGATTAAGGTGGTTACGGATACGCCCAGCGGTGCTGTGGCGACTGAAGCAAGATGTAATGGGTCCAATTGGGTCATACTGGACAAGAAGTTGAAACAGGAGGTGAAGCATTGCATGGATGAACTCCACTGTAGTATCGTAGTGATGAATGGATCACAGTCAAAGGTCCTTAGGCTTAACTTAGGATCCTCTGATGAATTCCAAACGCCCTTCTTGTCTGCTTCTTCTTCACCAGGTATAGACATTGGGAAGCTACAAGGTCACAGATTGAAGCCCTCAACTCCAGCGAGTAGCCCTGAAGAAGGAGCTACTTCCAATACAAAATCCACCTTAGTAAATTCAGAGTCCAGTTCTCACTCGGTAACTTCTTTTTTTCTTGTCTATGAACAAAATCCACTGTACGAGGGTCAGGGGTCACAGAGAAGGAAACACAGACCAAGCAATGAACACAAAAATTTCGATTTGGAGCCGCCATTAGACTTTGAGTTGCAAAGGGAACGGACTTTGACTTTTAAGGAACCCCCCATCTCATCTCTTGCTGGTGACAAGAGGGTAGTTTGGATTCCTCAGAACCTCGATGTCGATGAGAAGCCTCAAATAAGCAAAAACAACAGAATGAACCAAAGAATTAAATCTCCAACTTCTAAAACTCTACTAGAGAGCTTTGTACATTGTGATCAAGAGATGATGACTAATGGACGTGGGCTTAAGCAAGCTCAAAGTAGAAATTATGTTGTGAATTCGAGCATCAGAGATACCATTCCAGTGAGCAGAACTTCCTCTGTACCTCCTCCCCTATGCTCACAGTGCCAGAACAAAGCACCAGTTTTTGGAAAACCTCCCAGACGCTTCTCTTACAAAGAGATAGAAGAAGCTACCGATATGTTCTCAGACGTGAATTTCTTGGTTGAAGGTGGATTCGGTGTGGTTCACAAAGGAGTGCTAAGAGATGGCCAGGTCGTCGCAGTGAAACAGTTGAAGTTTAGTGGCTCCCAAGCAGATCTTGATTTTTGCAGAGAAGTCCGGGTACTGAGCTGTGCACAACACAGAAATGTTGTCCTGTTGATAGGATTTTGCTTAGAAGGCAATTTGAGGATATTAGTCTATGAGTACATATGCAATGGATCCTTGGACCTATATTTACATGGAAACGAGAAAGGCGCCCTAGATTGGAACTCGCGCTTAAAGATAGCAATAGGAGCTGCGCGAGGTTTACGCTACCTTCATGAAGATTGTAGAGTGGGTTGTATAGTGCACAGAGACATTAGACCCAGAAATATCCTCTTAACCCATGATTTTGAACCTGTGGTGGCGGATTTTGGCCTTGCCAGATGGCAGTCGGAATGGAACATGAATAGTGACGATCGAGTCATTGGAACTTCAGGGTATCTTGCACCGGAGTATCTCGATGCTGGAAATCTTACCTATAAAGTAGATGTGTATGCATTTGGAATTGTGTTGATAGAGTTAATAACAGGTCGAAGAATTAGTGAGTTGGAACATTTCAATGGACACTCGTTTCTTTCCGAATGCTTTCACCCTCTGCGCATGTTAGAGCCCAATCATATTTTACAGAACGTTCAATCTCTCAATCCATGCTTGGAGTTTGAGGAATCACAGGAGTTTAATCTTCAATTGCAAGCAATGGCCCGAGCTGCTTCCTTGTGTCTACGTCTAGATCCCAATGCCAGACCCCCGATGTCAAAGATCCTCAGAGTGCTGGAAGGGGCCGCTCCAGTTCGTCCAATCGGTTTAGACTTAAATTCAGTCGGTAACATAAGTGGCCATTTAAGTGGTTTGACGTCCCACACACAACCTAGAAGCACACGAAGTCATTCCCGGAGGCTCTCACATTGA 2280 0.4526 MRETPKPLHPSSTLSSQEFQPLSRTERTMLRNESVGSSSARHSATVSTVSNKVLVAVKAERVISKNALAWALTHVVHSSDCITLLAVYCGEKTGRRFWNFLRLAGDCTNGRREKLPERICEISESCSQMVLQLNDQIEVRVKIKVVTDTPSGAVATEARCNGSNWVILDKKLKQEVKHCMDELHCSIVVMNGSQSKVLRLNLGSSDEFQTPFLSASSSPGIDIGKLQGHRLKPSTPASSPEEGATSNTKSTLVNSESSSHSVTSFFLVYEQNPLYEGQGSQRRKHRPSNEHKNFDLEPPLDFELQRERTLTFKEPPISSLAGDKRVVWIPQNLDVDEKPQISKNNRMNQRIKSPTSKTLLESFVHCDQEMMTNGRGLKQAQSRNYVVNSSIRDTIPVSRTSSVPPPLCSQCQNKAPVFGKPPRRFSYKEIEEATDMFSDVNFLVEGGFGVVHKGVLRDGQVVAVKQLKFSGSQADLDFCREVRVLSCAQHRNVVLLIGFCLEGNLRILVYEYICNGSLDLYLHGNEKGALDWNSRLKIAIGAARGLRYLHEDCRVGCIVHRDIRPRNILLTHDFEPVVADFGLARWQSEWNMNSDDRVIGTSGYLAPEYLDAGNLTYKVDVYAFGIVLIELITGRRISELEHFNGHSFLSECFHPLRMLEPNHILQNVQSLNPCLEFEESQEFNLQLQAMARAASLCLRLDPNARPPMSKILRVLEGAAPVRPIGLDLNSVGNISGHLSGLTSHTQPRSTRSHSRRLSH 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1923 759 ProSitePatterns Tyrosine protein kinases specific active-site signature. 558 570 IPR008266 GO:0004672|GO:0006468
Bisa09g1923 759 MobiDBLite consensus disorder prediction 279 296 - -
Bisa09g1923 759 MobiDBLite consensus disorder prediction 8 22 - -
Bisa09g1923 759 MobiDBLite consensus disorder prediction 232 256 - -
Bisa09g1923 759 PIRSF SRK 405 754 IPR024171 GO:0004674
Bisa09g1923 759 PIRSF SRK 12 291 IPR024171 GO:0004674
Bisa09g1923 759 FunFam Os07g0541700 protein 513 601 - -
Bisa09g1923 759 Gene3D Phosphorylase Kinase; domain 1 403 512 - -
Bisa09g1923 759 MobiDBLite consensus disorder prediction 277 296 - -
Bisa09g1923 759 ProSiteProfiles Protein kinase domain profile. 437 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1923 759 MobiDBLite consensus disorder prediction 737 759 - -
Bisa09g1923 759 Pfam Protein tyrosine and serine/threonine kinase 443 678 IPR001245 GO:0004672|GO:0006468
Bisa09g1923 759 SMART tyrkin_6 437 715 IPR020635 GO:0004713|GO:0006468
Bisa09g1923 759 PANTHER OS01G0750732 PROTEIN 313 722 - -
Bisa09g1923 759 SUPERFAMILY Protein kinase-like (PK-like) 422 723 IPR011009 -
Bisa09g1923 759 Gene3D Transferase(Phosphotransferase) domain 1 513 722 - -
Bisa09g1923 759 MobiDBLite consensus disorder prediction 1 22 - -
Bisa09g1923 759 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 409 512 - -
Bisa09g1923 759 MobiDBLite consensus disorder prediction 223 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1923 Bisa-ChrBisa09 30422907 30428802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1923 412 711 Trihelix Transcription Factor Family AT1G68690 46.230 8.42e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Bisa09g1923 PK_Tyr_Ser-Thr 1.1e-42 CL0016