Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1911 ATGGCTATTCGCGTTACCGCTTCCTACTCTGGTTACTTTGCCCAGAGCCTTGCTTCCTCCGCCGGTTCTCGCGCGGCAAATTCGCGTTGCTTTCAAGAATGCTGGATACGGTCTTGCATATTTGGCTCTGGCCAGAAATCTGATCTTGATCCCTCCGGCGGCGTGCGTAATTACCGTTCCGATTACCGACGGCCAAAATCGAATTGCTGGGCTAATTGTTCATCGTCTATGTATTCTACAATCTCCGCAGAATTTCTGGGTGATAGTTGTAACAATCCGATCGTATTGGGTTTGATTTCGATGATGAAGTCAACGGTTGGTGTATCAGCTTCATCTGCGGCGACTATGGGTATAAACGGTGTTTCCCCCACTTCGATTATTCCCTTTTTGAAGGGATCGAAGAGCCTTCCTTCCAACGAGTCGATTCCCGTTCCTACAACTCTTGAGGTGGATAAAGGAGGGACAGAGTGTTGTGTTGATGCGAATTCGCGATACGGTCCAAAAGGTTTTGAGAAGTCAAGTTGGCTGTCGCGCCTGTTGGATTTCTGTTCAGAGGATGCGAAGGCTGTGTTTACCGCTGTGACTGTTAGTGTGCTCTTCCGATCGTTCTTGGCTGAACCGAGATCGATTCCCTCATCTTCTATGTCCCCAACTCTGGATTCGGGCGACCGTATTTTAGCGGAGAAGGTTTCCTTCTTCTTTAGAAAGCCTGATGTTTCAGATATTGTCATATTTAAGGCACCACCAATTTTACAGGAATTTGGTTATAGTTCAGCTGATGAATTTATTAAAAGAATTGTGGCAAAGGCTGGGGACTGTGTGGAGGTTCGTGATGGAAAACTATTGGTGAACGGTGTTGCTCAAGAAGAGGAATTCGTTGTAGAGCCACTTGCCTATGAGATGGAGCCAATGGTTGTGCCAGAAGGTTATGTCTTTGTGATGGGAGACAATCGTAATAATAGCTTTGACTCACATGATTGGGGTCCTCTTCCTATAAAGAACATTGTTGGTAGATCCATGTTTCGGTACTGGCCTCCGTCTAAAGTATCTGACACCCTTTATAAACCACCACCCACAAATAACTCTCTGGCAATTTATTGA 1101 0.4596 MAIRVTASYSGYFAQSLASSAGSRAANSRCFQECWIRSCIFGSGQKSDLDPSGGVRNYRSDYRRPKSNCWANCSSSMYSTISAEFLGDSCNNPIVLGLISMMKSTVGVSASSAATMGINGVSPTSIIPFLKGSKSLPSNESIPVPTTLEVDKGGTECCVDANSRYGPKGFEKSSWLSRLLDFCSEDAKAVFTAVTVSVLFRSFLAEPRSIPSSSMSPTLDSGDRILAEKVSFFFRKPDVSDIVIFKAPPILQEFGYSSADEFIKRIVAKAGDCVEVRDGKLLVNGVAQEEEFVVEPLAYEMEPMVVPEGYVFVMGDNRNNSFDSHDWGPLPIKNIVGRSMFRYWPPSKVSDTLYKPPPTNNSLAIY 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1911 366 CDD S26_SPase_I 206 338 IPR019533 GO:0004252|GO:0006465
Bisa09g1911 366 FunFam Peptidase/ serine-type peptidase 212 343 - -
Bisa09g1911 366 PRINTS Bacterial leader peptidase 1 (S26A) family signature 203 219 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa09g1911 366 PRINTS Bacterial leader peptidase 1 (S26A) family signature 262 274 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa09g1911 366 PRINTS Bacterial leader peptidase 1 (S26A) family signature 306 325 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa09g1911 366 Gene3D Umud Fragment, subunit A 200 356 - -
Bisa09g1911 366 PANTHER SIGNAL PEPTIDASE I 124 351 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa09g1911 366 Pfam Signal peptidase, peptidase S26 187 344 IPR019533 GO:0004252|GO:0006465
Bisa09g1911 366 NCBIfam signal peptidase I 189 345 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bisa09g1911 366 SUPERFAMILY LexA/Signal peptidase 201 350 IPR036286 -
Bisa09g1911 366 ProSitePatterns Signal peptidases I signature 3. 311 324 IPR019758 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1911 Bisa-ChrBisa09 29994255 29996585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1911 215 345 MADS-box Gene Family AT1G29960 34.586 2.13e-16 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1911 09 29994255 29996585 Bisa09g1911 09 29994255 29996585 ECH