Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1903 ATGAACAGTAACAGATGCTGCTCTTCGGCTTCTTCCTCCGACGACTCCTCCTCTTCGGGCTCGTCCTTATCGAGCAAGCCCGGCAGGAATACCCACAAGCCCGACCGAATCAAAGGCCCGTGGAGCGCGGAAGAAGACCGGATTCTGACCCGACTCGTGGAGCGATACGGGCCCCGAAACTGGTCCTTGATAAGCCGGTACATAAACGGACGGTCAGGGAAGTCGTGCCGGCTGAGATGGTGTAACCAGCTGAGCCCGAGCGTGGAGCACAGGCCTTTCTCCCAGGAGGAGGACGAAGCCATATTGGCGGCCCATGCCCAGTACGGCAACAGATGGGCCACCATAGCCCGCCTCCTCCCTGGCCGGACCGACAATGCCGTGAAGAACCACTGGAATTCCACGCTCAAGAGGAGGGTGAGAGGGCAGCGCGTGGCCGACGCGCCTGCTGGTGGTACCGTTACGGTTGATCACGAGAGGGGCGTCACTGTGAGTTCACCGGGATCTGCGGGATTGGGAGGATTGGAATTGGAGGATGACCCGTTGACCGCGTTGACTCTGGCACCGCCGGGCTACGGTGGTCGGAATGTCACGGTGGGTGATGAGCCACCGAGCTTGGAGAGCGTGCCGGCGGGGTTTTGGGAGGTGATGAGGGAGGCCATAGCGAGGGAAGTCAGAGAATATGTCTCGTCCACGTTTTCTGAGAACTCGGGCTTCCATTGA 720 0.6042 MNSNRCCSSASSSDDSSSSGSSLSSKPGRNTHKPDRIKGPWSAEEDRILTRLVERYGPRNWSLISRYINGRSGKSCRLRWCNQLSPSVEHRPFSQEEDEAILAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVRGQRVADAPAGGTVTVDHERGVTVSSPGSAGLGGLELEDDPLTALTLAPPGYGGRNVTVGDEPPSLESVPAGFWEVMREAIAREVREYVSSTFSENSGFH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1903 239 Gene3D - 37 89 - -
Bisa09g1903 239 Gene3D - 91 148 - -
Bisa09g1903 239 Pfam Myb-like DNA-binding domain 41 99 - -
Bisa09g1903 239 MobiDBLite consensus disorder prediction 1 41 - -
Bisa09g1903 239 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Bisa09g1903 239 SUPERFAMILY Homeodomain-like 35 131 IPR009057 -
Bisa09g1903 239 PANTHER MYB PROTEIN-RELATED 38 175 - -
Bisa09g1903 239 SMART sant 37 86 IPR001005 -
Bisa09g1903 239 SMART sant 89 137 IPR001005 -
Bisa09g1903 239 CDD SANT 92 135 IPR001005 -
Bisa09g1903 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 88 IPR017930 -
Bisa09g1903 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 139 IPR017930 -
Bisa09g1903 239 MobiDBLite consensus disorder prediction 1 28 - -
Bisa09g1903 239 CDD SANT 40 82 IPR001005 -
Bisa09g1903 239 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Bisa09g1903 239 FunFam MYB transcription factor 38 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1903 Bisa-ChrBisa09 29895809 29896528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1903 35 141 MYB Transcription Factor Family AT3G50060 78.505 6.03e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa09g1903 Myb_DNA-bind_6 4.8e-18 CL0123