Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1871 ATGGCTCTTCTTCTAGACAATTGCGACGGCATACTACTCTCTCTCGACTCTCACAAATCGGTGCCCGCACCCTTCCTCACCAAGACATACCAGCTCGTCGACGATCCCGCCACGGATCACGTAGTCTCTTGGGGCGAAGATGACACCACCTTCGTCGTTTGGCGTCCCCCCGAGTTCGCCAGAGACCTCCTCCCCAACTACTTCAAGCACAACAACTTCTCCAGCTTCGTCCGCCAGCTCAACACCTATGGTTTCAGGAAGATTGTGCCCGACAGGTGGGAGTTCGCGAACGAGTTCTTCAAGAAGGGGGAGAAGCACTTGCTGTGCGAGATCCACAGGAGGAAAACGGCTCAGCCTCATCATCATCATCAGGTTGGCGTGAACCATCACGGGGTCAACGTTCCCGCCTTCTTTCCCTTCCCTGCCAGACTCAGCATCTCTCCCCCTAACGACCTCGAGGAGCAGCACAATTGGTGTGACTCCCCCCCACCAGCACGTGTTTCGTCTGTCGTTAACGCTTCCAACGCCAACGGCTACAGCACCTCCGTCACTGCCCTCTCCGAGGACAACGAGCGCCTCCGGCGAAGCAACACCATGCTCATGTCCGAGCTCGCTCACATGAAGAAGCTCTACAACGACATCATCTACTTCGTCCAGAACCACGTCAAGCCCGTCGCTCCTAGCAACTCCTTCGCTTCTTCTTTGCTTCTCTGTAATAATACGCCTCACGCTTCTAATGTTTCTATGGGGCAAAGGCCCATGAACCAGCTTTTGGGGTACCAAGCTCCTCCATCTCAGGCCCATCTTGTGAACTCGCCCACCAACACTTCAAACAGCTCCATAACCATTGTTGAGGAACCCAGCAGCAACACCAACACCTGCAAGACGAAGCTTTTTGGCGTATCGCTTCAATCTAAAAAAAGAGTGCATCCTGAGTATGGTTTTAATCCCACGAATTCTTCAGAGACCAACAAGGCTCGCTTGGTCTTAGATAAGGATGACTTGGGCTTGAATCTCATGCCTCCTACTTCTTGTTAG 1038 0.5318 MALLLDNCDGILLSLDSHKSVPAPFLTKTYQLVDDPATDHVVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPHHHHQVGVNHHGVNVPAFFPFPARLSISPPNDLEEQHNWCDSPPPARVSSVVNASNANGYSTSVTALSEDNERLRRSNTMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSFASSLLLCNNTPHASNVSMGQRPMNQLLGYQAPPSQAHLVNSPTNTSNSSITIVEEPSSNTNTCKTKLFGVSLQSKKRVHPEYGFNPTNSSETNKARLVLDKDDLGLNLMPPTSC 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1871 345 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1871 345 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1871 345 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 271 IPR027725 -
Bisa09g1871 345 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1871 345 Gene3D - 17 116 IPR036388 -
Bisa09g1871 345 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Bisa09g1871 345 FunFam Heat stress transcription factor B-4 17 115 - -
Bisa09g1871 345 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1871 345 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1871 345 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa09g1871 Bisa-ChrBisa09 29298790 29299957 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1871 1 340 HSF AT1G46264 57.692 1.39e-125 362
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa09g1871 HSF_DNA-bind 3.6e-32 CL0123
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0241 05 3811585 3812840 Bisa09g1871 09 29298790 29299957 CCT
Bisa09g1871 09 29298790 29299957 Bisa09g1871 09 29298790 29299957 ECH