Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1870 ATGGATAGTGCTAGTAGCAGCAGTGACGAGTTAAAGTGGTGGTGGCCATGGCACGATGAAATGAACAGGACGATGGAACTCCCTGAGGTTCCGTCGCGGCAGCCACCGCCGGAGTTATGTGGAGTAACTAACACCTCAGGCGGCGCCGCGACGCGTGAGACTGAGAATCCTCAAGTGGGCAACTGGGCCTCGTTCACGAACTTAGAGTCGTGCAATACAATCTCTTTCGGCAGGCCGAGCCCGGGCCCAGGCCCAGGCGGAGAAGGTTCTAATTGTTGGGTGGGAGGCACGAGGGAGATGGTATTTAGGATAGCGGCGATGCAGCCGATGGAGATAGACCCGGAGTCGGTGAAGCCGCCGAAGAGAAGGAACGTGAAGATATCGAAGGACCCTCAGAGCGTAGCGGCTCGGCTTCGGAGAGAGAGGATCAGCGAGAGAATAAGGATACTGCAGAGACTGGTGCCAGGTGGCACCAAGATGGACACCGCCTCTATGTTGGACGAAGCCGTTCACTACCTCAAGTTTCTCAAGGCCCAGGTTCAGTCCCTGCAGCGACAAGCAGCTTCCGCTGGTAGGCCCACGGGCTTAGCTTTACCACTTCCTCTGCTTATGTCTTCTGGTTCTGCCAATCAAAATCATCTTCACCATAACACCACTTAA 660 0.5561 MDSASSSSDELKWWWPWHDEMNRTMELPEVPSRQPPPELCGVTNTSGGAATRETENPQVGNWASFTNLESCNTISFGRPSPGPGPGGEGSNCWVGGTREMVFRIAAMQPMEIDPESVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRLVPGGTKMDTASMLDEAVHYLKFLKAQVQSLQRQAASAGRPTGLALPLPLLMSSGSANQNHLHHNTT 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1870 219 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 176 IPR011598 GO:0046983
Bisa09g1870 219 Coils Coil 166 186 - -
Bisa09g1870 219 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 189 IPR036638 GO:0046983
Bisa09g1870 219 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 83 202 IPR045843 GO:0003700|GO:0006355
Bisa09g1870 219 SMART finulus 133 182 IPR011598 GO:0046983
Bisa09g1870 219 Pfam Helix-loop-helix DNA-binding domain 137 176 IPR011598 GO:0046983
Bisa09g1870 219 Gene3D - 126 192 IPR036638 GO:0046983
Bisa09g1870 219 FunFam BHLH transcription factor 130 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1870 Bisa-ChrBisa09 29287088 29287747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1870 86 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 76.415 5.02e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa09g1870 HLH 9e-07 No_clan