Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1867 ATGACGAACTATGAGTTTCTGAACGATCAGCTGTCAAAGCATACCTCAATTTTCGGGCTACGACTGTGGGTGGTGTTGGGGATATGCGTAGGAGCGGCCATAGTACTCGTACTGTTTCTCATATCGCTCTGGTTCACTTCCAGGCGTAACAATTCCTCCACCCTCAACTCTTCACACAGCCTCACTATCCCCAACGTCTCCAAGGAGATCCAGGAGATCCGTATAGACCCGTTTCGTGACCAGACCCATCCGAGGTCCGACCCGTATCCGGAAGCAGAGCCTGTGGATAGGGCCCAACCCATGCTCGTTCAGCAGCAGGACGAAAGCCACAGAATTCACATAGAAATTGGTAAGGGTCACCGGATTTCGTACCCAGAGAAGGGAGGTGGCTCGTCGCATGGAAGTGGCGAGCAGGGTTCGATTGCTGCGCCGGAGGTTTCTCATTTGGGTTGGGGGCATTGGTACACTCTTAGGGAGCTGGAGGTCTCTACTAATGGATTTGCCGACGAGAATGTGATTGGTGAAGGTGGCTACGGAATTGTTTATCGCGGTGTGTTGGAAGATGATACCAAGGTTGCTGTTAAGAATTTGCTCAATAACAGGGGACAAGCTGAGAGGGAATTCAAGGTCGAAGTTGAAGCAATTGGACGTGTTCGGCACAAGAATTTAGTGAGGTTACTCGGATATTGTGTTGAAGGAGCCCATAGGATGCTTGTTTACGAGTATGTTGACAATGGAAACCTGGAACAGTGGCTTCACGGAGATGTTGGGCCTTCTAGCCCGCTAACCTGGGAGATTCGCGTGAATATTATACTTGGAACTGCAAAAGGGTTGACATACCTTCATGAGGGGCTTGAACCCAAGGTGGTTCACCGTGATATCAAGTCAAGCAACATCTTGCTTGATAAGCAATGGAATCCTAAAGTTTCTGATTTTGGCCTTGCAAAGCTCCTGGGATCAGAGAGAACTTATGTAACAACCCGTGTGATGGGAACATTCGGGTATGTGGCTCCAGAATATGCAAGTACTGGTATGTTAAATGAAAGAAGCGATGTGTATAGCTTTGGGGTTCTTATCATGGAGATAATCTCTGGGAGAAACCCAGTAGATTATAGTCGCCCTCCTGGAGAGGTGAACCTGGTTGAATGGCTGAAGACAATGGTTAGTAAACGAAATGCAGAAGCAGTGCTCGATCCTAGGCTACCTGAGAAGCCTTCTTCCAGGGCTCTGAAGCGTGTCTTGTTAGTAGCTTTGAGGTCTGTGGATCCAAATGCCCAGAAAAGGCCAAAGCTGGGGCATGTCATACATATGCTTGAAGCTGATGAATTTCCTTTGCGAGATGACCGTAGAATCGGGAGGGAAAGCGGACACTCCCAGCGGGAGAACATGAGCGATAAGCTGATGGAGAAGCGAGTAAATGAATCAGGCGACAGTAGTGGGAATGAAAGTAGCATCCAAACTAATAATTCTTTGTGTAGAAATCCAGAAACTGAAGAACAGTAG 1503 0.481 MTNYEFLNDQLSKHTSIFGLRLWVVLGICVGAAIVLVLFLISLWFTSRRNNSSTLNSSHSLTIPNVSKEIQEIRIDPFRDQTHPRSDPYPEAEPVDRAQPMLVQQQDESHRIHIEIGKGHRISYPEKGGGSSHGSGEQGSIAAPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYRGVLEDDTKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVDNGNLEQWLHGDVGPSSPLTWEIRVNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERTYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLIMEIISGRNPVDYSRPPGEVNLVEWLKTMVSKRNAEAVLDPRLPEKPSSRALKRVLLVALRSVDPNAQKRPKLGHVIHMLEADEFPLRDDRRIGRESGHSQRENMSDKLMEKRVNESGDSSGNESSIQTNNSLCRNPETEEQ 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1867 500 SUPERFAMILY Protein kinase-like (PK-like) 149 439 IPR011009 -
Bisa09g1867 500 FunFam Putative receptor-like serine/threonine-protein kinase 243 453 - -
Bisa09g1867 500 PANTHER OS01G0323000 PROTEIN 2 469 - -
Bisa09g1867 500 MobiDBLite consensus disorder prediction 448 476 - -
Bisa09g1867 500 Gene3D Transferase(Phosphotransferase) domain 1 243 450 - -
Bisa09g1867 500 FunFam Probable serine/threonine-protein kinase At1g01540 147 242 - -
Bisa09g1867 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Bisa09g1867 500 Gene3D Phosphorylase Kinase; domain 1 145 242 - -
Bisa09g1867 500 CDD STKc_IRAK 173 439 - -
Bisa09g1867 500 ProSiteProfiles Protein kinase domain profile. 167 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1867 500 MobiDBLite consensus disorder prediction 121 140 - -
Bisa09g1867 500 SMART serkin_6 167 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1867 500 Pfam Protein kinase domain 168 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1867 500 MobiDBLite consensus disorder prediction 477 494 - -
Bisa09g1867 500 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
Bisa09g1867 500 MobiDBLite consensus disorder prediction 448 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1867 Bisa-ChrBisa09 29233694 29236113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1867 126 478 Trihelix Transcription Factor Family AT1G70460 44.231 1.19e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bisa09g1867 Pkinase 7.6e-46 CL0016