Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1865 ATGGGAGAGCCTCATTGCTCCAGAGCGACTCCGCCTGCCTCACTCCCGCCTGGTTGCCGATTCTACCCTTCCGAAGAGCAGCTTCTCTGTTACTATTTGACCAACAAGAACGCTAGTGGTGACTTCTATGGCTGCGATTTGATCAGAGAGCTCAACCTGTACGATCATGACCCTTTCCAATTGCCGGACATAGCGTGCTTTTCCTATGGTTATGGGGGGAGGAAGAGGCATTGGTACTGTTATACCGTCAGGGTTTTGAAGGACACCCGTAGGAAGATTAGGAAGGTTAAGAGCGGGTATTGGATGAGAGAGGGACGAGTTAGGAAGGTTCTGAGTGATGGTGGGAATGTGGTCTTGGGCACCAGGACCACGTTCGTTTTCTATTTGGGGAGTTCCCCCAAGAACGCCAGCCGGACCAGTTGGATGTTGTATGAGTATGCATTGGTTGATCATCTTAAGGCTTCATTCGATGTTTGTCGTGTATTTGTTAAACCTCATCATAGGAATAATGCATCAGAGAATGGTTTGAGTTCTTGTGCAGAAGAAAGTTTCTCAGCAGTACGTCATGTTGGTATTCAGCATGATGGATATGTTTCATCTGATATTATTGAGGCTAGATTGTGTGGTGACTGCTCTATTGACGGAAAGAATGAGACCCCAGTGTCTCCACCAAGACATGCTGGTGAACTAGATGAGCATCAGGTTGCTCCTGCATCAGTTTCTGTTGCTACTTGCCAGTGTTCCGTGGTTCCTCAAGGCAGTCCACCGGGAAAGCTTTCTGAACTTCCTGGTGGTGGTGCAATATTTGCTGAAGCCCTGACATCTCAGCAACATTTACTTTCGATTCCAGAGGGGGATTTCATTGAGTTGGATGATCTAGCATGA 885 0.4757 MGEPHCSRATPPASLPPGCRFYPSEEQLLCYYLTNKNASGDFYGCDLIRELNLYDHDPFQLPDIACFSYGYGGRKRHWYCYTVRVLKDTRRKIRKVKSGYWMREGRVRKVLSDGGNVVLGTRTTFVFYLGSSPKNASRTSWMLYEYALVDHLKASFDVCRVFVKPHHRNNASENGLSSCAEESFSAVRHVGIQHDGYVSSDIIEARLCGDCSIDGKNETPVSPPRHAGELDEHQVAPASVSVATCQCSVVPQGSPPGKLSELPGGGAIFAEALTSQQHLLSIPEGDFIELDDLA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1865 294 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
Bisa09g1865 294 Gene3D NAC domain 24 169 IPR036093 GO:0003677|GO:0006355
Bisa09g1865 294 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 204 - -
Bisa09g1865 294 Pfam No apical meristem (NAM) protein 16 148 IPR003441 GO:0003677|GO:0006355
Bisa09g1865 294 SUPERFAMILY NAC domain 9 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1865 Bisa-ChrBisa09 29215550 29218876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1865 15 171 NAC Transcription Factor Family AT1G76420 35.758 1.70e-24 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa09g1865 NAM 1.2e-22 No_clan