Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1839 ATGGCGTTTGTGAGTTATTGTGTATTGATAATCGTTTTCATTTCAACCTTGTCTTTCCAATGTTCATACTCATCCTCTCGAAGCATCGTATCCCTGTCGGTGGAGAATCCAGGAGACGTAGTGAAATCAACAAATGGGATGTTCAGTGCGGGGTTTTATGAAGTAGGTGAGAATGCCTACTCTTTTGCCATTTGGTTCACCGAACCTGATGGCAAGGTTAACTTGACCGCGATTTGGATGGCAAATCGCGACCAACCTGTGAATGGAGTGGGCTCAACACTTACCCTCCATGACAATGGCAATCTGGTGTTAAATGACGCTGGTTACTTGGATGTTTGGGTCACCAACGTCACCTCAGCCACCTCCCCGCAATTGATTCTCAACAATGACGGTAATCTTGTTCTGTATGAATCCCATAATAATAATGGTAGTGGTGCTATTTTGTGGCAAAGTTTTGATTATCCAACAAATACACTTGTCCCTGGACAACATCTCACAAGATACACCAGCCTTGTTTCCTCCAGAAGTCAGACCAATCGCTCCTCTGGTTTTTATAAGCTGTTTTTCGACAACGATAATCTTCTTCGTCTTCTCTATGATGGCCCTGATACTTCAAGCGTATATTGGTCAGATCCTGGGCTTGTTAGCTGGGAAGCTGGAAGGTCCTCCTACAATGCCACTCGCATAGCAGTTCTCGATTCCTATGGAAATTTCAGTTCAACCGATGATTTCACTTTCATGACCTCAGATTATGGTCCTGTGCTTCAAAGAAGATTGAACATAGATTATGATGGTAATGTGCGAGTCTACAGTCGATCAAAATGGGGAGAAAAATGGAATGTTTCGTGGGAGGCTAAATCAGAACCTTGCGAGATTCATGGCGTCTGCGGAGCCAATAGTGTGTGTAGCTACAATCCTTATTTTGGTAGAAAATGCTCTTGTCTACCAGGTTATATGGCTAAGAACAAGAGTGACTGGTCTTTTGGGTGTAAGCCGAAATTTCATTTGTCTTGCAACTTAACTGAGTCCCGCTTTTTTCATATAGGTAATGCTGAGTTCTACGGCTACGACTATGGGTTCTTCCCCAATTACACCTATAAACAATGTGAGGTACTATGCTTGAAAATACGTAATTGCAAAGGCTTCCAATATAAATTCCGGAAAAATGGCACTTATTCTTGTTATCCAAAGACATCATTGCACAATGGGTATCTTTCCCCTGATTTTCATGGATCAATTTACTTCAGACTCCCGAAAGCCAAATCTTTTGGTTTCAAAAAATCTATTATGAAATGTAACGATGTGAACACTGTGAATCTTGAGAGAGTGTATGCCTTAAGACAGGACAGAGTTATAGTGAAGGCATTTTTGTGGTTGGTGGTGGGAATTGGAGGCTTTGAAATTGTGTGCATCTTTCTGGTTTGGTGTCTGTTGATTAGGACTTGGAAGAAGCCCGATGCAGATGGACACATCAACCATCTTGCTGTGACAGGATTTAAGAATTATACATACAATGAGTTGAAAAAGGCAACAAGAGGGTTCCGTGAAGAGATAGGAAGAGGTGCTGGAGGAATCGTATATAAGGGTGTGTTTTCAGATCAACGAGTTGCAGCAATTAAGAGACTTAACAAAGCAACTAACCAGGGAGAAAGTGAGTTTCTGGCTGAGGTAAACATAATTGGAGAGCTTAACCACATGAACCTGATAGATATGTGGGGGTATTGTGTCAAGGGAAAGCACAGGTTGTTGGTGTATGAGTACATGGAGAGTGGTTCTTTGGCTGAAAATTTGGTTTCCAGCAACAACTCGCTTGATTGGAGAAAGACGTATGACATTGCTCTGGGAACAGCAAAAGGAAAAAGCCTACATGACTTCCAGACAATTGATAATGAAGAGTTGCATCGTGGAAGGCTTGTAACATGGGTGAAGGAGAAAAAGAACAAAGGAAATGAAATGACATCATGGGTGGAATAA 1974 0.4184 MAFVSYCVLIIVFISTLSFQCSYSSSRSIVSLSVENPGDVVKSTNGMFSAGFYEVGENAYSFAIWFTEPDGKVNLTAIWMANRDQPVNGVGSTLTLHDNGNLVLNDAGYLDVWVTNVTSATSPQLILNNDGNLVLYESHNNNGSGAILWQSFDYPTNTLVPGQHLTRYTSLVSSRSQTNRSSGFYKLFFDNDNLLRLLYDGPDTSSVYWSDPGLVSWEAGRSSYNATRIAVLDSYGNFSSTDDFTFMTSDYGPVLQRRLNIDYDGNVRVYSRSKWGEKWNVSWEAKSEPCEIHGVCGANSVCSYNPYFGRKCSCLPGYMAKNKSDWSFGCKPKFHLSCNLTESRFFHIGNAEFYGYDYGFFPNYTYKQCEVLCLKIRNCKGFQYKFRKNGTYSCYPKTSLHNGYLSPDFHGSIYFRLPKAKSFGFKKSIMKCNDVNTVNLERVYALRQDRVIVKAFLWLVVGIGGFEIVCIFLVWCLLIRTWKKPDADGHINHLAVTGFKNYTYNELKKATRGFREEIGRGAGGIVYKGVFSDQRVAAIKRLNKATNQGESEFLAEVNIIGELNHMNLIDMWGYCVKGKHRLLVYEYMESGSLAENLVSSNNSLDWRKTYDIALGTAKGKSLHDFQTIDNEELHRGRLVTWVKEKKNKGNEMTSWVE 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1839 657 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Bisa09g1839 657 SMART tyrkin_6 514 657 IPR020635 GO:0004713|GO:0006468
Bisa09g1839 657 Gene3D - 23 154 IPR036426 -
Bisa09g1839 657 Pfam D-mannose binding lectin 76 168 IPR001480 -
Bisa09g1839 657 Gene3D - 155 282 IPR036426 -
Bisa09g1839 657 SUPERFAMILY Protein kinase-like (PK-like) 493 619 IPR011009 -
Bisa09g1839 657 Pfam Protein tyrosine and serine/threonine kinase 515 620 IPR001245 GO:0004672|GO:0006468
Bisa09g1839 657 Gene3D Phosphorylase Kinase; domain 1 483 587 - -
Bisa09g1839 657 PANTHER OS07G0415500 PROTEIN 8 619 - -
Bisa09g1839 657 SMART blect_4 32 155 IPR001480 -
Bisa09g1839 657 Pfam S-locus glycoprotein domain 244 321 IPR000858 GO:0048544
Bisa09g1839 657 FunFam S-receptor-like serine/threonine-protein kinase 482 587 - -
Bisa09g1839 657 ProSiteProfiles Protein kinase domain profile. 512 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1839 657 CDD B_lectin 43 155 IPR001480 -
Bisa09g1839 657 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 170 IPR036426 -
Bisa09g1839 657 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1839 Bisa-ChrBisa09 28751373 28753616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1839 474 619 Receptor kinase-like Gene Family AT3G19300 40.816 9.47e-29 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa09g1839 PK_Tyr_Ser-Thr 4.1e-16 CL0016