Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1832 ATGAAGACTCGCGCGGCAAAGAGAAAGGCAGAGGCAGCCAACCTAGTTCAAAATAAATCTCCCAAGAGGAAGCGGGTGGTGTTGGGAGAGCTTCCCAATCTAACCAACCTTATTGATCCTGTAAATTCGAATCCGGGGTTGGAGAAACCGAAATATCGAAGGAATACGAGGGCCAAGAAGGATGCGGGGAAGAAGGATAGCCTCTCTTTCGGGGATCCGAAGTTGGATGAGAGGGAGATCAAGGCGAAGAAGGCAATTGAGGTAGATGCGAAGTCTGGTACCGATGCGAATTTGGATGATCTACAGAATAGCGAGCCTTATGTTTCAGACATTTATCAGTATTTACGCAATATGGAGATGGAGCCTAAGAGAAGACCAATACCTGATTACCTTGAGAAAGTTCAGAAAGATGTTACGGCCAACATGAGAGGAATATTGGTTGATTGGTTAGTGGAAGTTGCAGAGGAGTACAAGCTTCTCTCTGACACTCTTTACCTCTCTGTTTCCTACATTGATCGCTTCCTTTCAGCCAATAAGGTCCCGAGGCAGAGACTTCAGTTGCTGGGTGTTTCGTCAATGTTCATTGCATCGAAGTATGAAGAAATTAGTCCTCCACATGTGGAAGAATTCTGTTACATCACCGATAATACGTACACTAAAGCAGAGGTCGTGAATATGGAGGCTGCTATACTAAAGTCTCTAAAATTTGAAATGGGCAACCCCACCGTAAAGACATTTCTAAGGCAAGAATACTCTGAAAACTTCCTTAATATAATTACTCCAGACCTGCAGCTTGAGTTTCTTGGCAGCTATCTTGCCGAGCTAAGTTTGTTGGATTATAATTGTGTTAAGTTCTTGCCTTCTCTGGTGGCTGCTTCAGTCATATTTCTTGCTAGATATATCATCTGGCCTAAAGTGCATCCCTGGAATTCGGCCCTGCAAGAATGCTCGGGATATAAATCAGCTGAGTTGAAAGAATGTGTGCTTATCTTACACGACTTGTATCTGGCAAGAAGAGGAGGATCTTTGCTAGCTATACGGGAGAAATACAAACAGCACAAGTTCAAGTATGTGGCTATGCTGCCTTCTCCTCCGGAGATAGCAATGTCTTTCTTTGAAGAAGAGTAG 1128 0.4379 MKTRAAKRKAEAANLVQNKSPKRKRVVLGELPNLTNLIDPVNSNPGLEKPKYRRNTRAKKDAGKKDSLSFGDPKLDEREIKAKKAIEVDAKSGTDANLDDLQNSEPYVSDIYQYLRNMEMEPKRRPIPDYLEKVQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLSVSYIDRFLSANKVPRQRLQLLGVSSMFIASKYEEISPPHVEEFCYITDNTYTKAEVVNMEAAILKSLKFEMGNPTVKTFLRQEYSENFLNIITPDLQLEFLGSYLAELSLLDYNCVKFLPSLVAASVIFLARYIIWPKVHPWNSALQECSGYKSAELKECVLILHDLYLARRGGSLLAIREKYKQHKFKYVAMLPSPPEIAMSFFEEE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1832 375 SMART cyclin_7 254 333 IPR013763 -
Bisa09g1832 375 SMART cyclin_7 148 232 IPR013763 -
Bisa09g1832 375 MobiDBLite consensus disorder prediction 50 74 - -
Bisa09g1832 375 PIRSF Cyclin_A_B_D_E 1 372 IPR046965 GO:0016538|GO:0044772
Bisa09g1832 375 Gene3D - 126 239 - -
Bisa09g1832 375 MobiDBLite consensus disorder prediction 1 22 - -
Bisa09g1832 375 MobiDBLite consensus disorder prediction 35 74 - -
Bisa09g1832 375 PANTHER CYCLINS 84 352 IPR039361 -
Bisa09g1832 375 Pfam Cyclin, N-terminal domain 110 238 IPR006671 -
Bisa09g1832 375 CDD CYCLIN_AtCycA-like_rpt2 241 355 - -
Bisa09g1832 375 Pfam Cyclin, C-terminal domain 241 363 IPR004367 -
Bisa09g1832 375 SUPERFAMILY Cyclin-like 99 238 IPR036915 -
Bisa09g1832 375 Gene3D - 110 360 - -
Bisa09g1832 375 FunFam Mitotic cyclin 6 126 226 - -
Bisa09g1832 375 SMART Cyclin_C_2 241 364 IPR004367 -
Bisa09g1832 375 FunFam Cyclin A1 228 360 - -
Bisa09g1832 375 ProSitePatterns Cyclins signature. 143 174 IPR006671 -
Bisa09g1832 375 SUPERFAMILY Cyclin-like 241 365 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1832 Bisa-ChrBisa09 28605336 28607379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1832 3 374 Core Cell Cycle Gene Families AT5G43080 55.764 6.95e-140 400