Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1804 ATGGGAACTGAGAGTCCAGCTAATTACACCTACTTGGGACGCAGCATCAGCGAATTGAGCATCAACGACAATTCTTCTTCGGCTTTCAGCGATTGTAACAGTGACAGATCTGGTGAATTCGCCTCTGCTTCTTCCCAGAGCCGCAGTCTTCTTATCGCCTGCGCTTCTGAGAATTCCGATGACTTTATTCTCCAGCTTGTCTCTGATCTCCACTCCTCTTCCCTCGACGACCAGAAGCAGGCCGCCTTGGAGATCAGATTACTCGCCAAGAACAAGCCCGAGAATCGCCTCAAAATCGCCAAGGCCGGCGCGATTAAGCCCTTAATTTCTCTTATATCCTCCCCCGACATGCAACTCCAAGAGTACGGTGTCACGGCGATTCTGAATCTCTCCCTGTGCGACGAGAACAAAGAGCTCATCGCCTCCTCGGGAGCGATTAAGCCGCTGGTTCGAGCGCTCAAGACAGGGACGCCAACGGCGAAAGAGAACGCGGCGTGTGCTTTGCTTCGTCTATCTCAAGTAGAGGAGAACAAGATCGCAATCGGACGGTCGGGAGCCATTCCCCTGCTGGTAAACCTTCTAGAAAACGGAGGATTCCGCGGGAAGAAAGACGCGTCGACGGCGCTCTATTCTCTCTGTTCCACGAAGGAGAACAAGATAAGAGCAGTACAAGCAGGAATCATGAAGGTATTGGTGGAATTGATGGCTGATTTCGGATCAAACATGGTGGACAAGTCAGCGTACGTGCTGAGCGTGCTGATATCGGTGCCGGAGGCGAGGACGGCAATGGTGGATGAAGGAGGGATTCCGGTGCTGGTGGAAATCATAGAGGTGGGGTCACAGAGACAGAAGGAAATCGCAGTGGTGACTCTGTTGCAGATTTGCGAGGACAGCGTGACGTACCGTACCATGGTTGCTCGCGAAGGAGCCATTCCTCCCTTGGTTGCATTGTCGCAGTCCGGCACCAATCGTGCCAAACAGAAGGCGGAGTCACTAATAGAGCTTCTACGGCAACCAAGATCCGGCAACGTCGCCGGCCGTACCTCACAAGTGCCGGCATAA 1062 0.5339 MGTESPANYTYLGRSISELSINDNSSSAFSDCNSDRSGEFASASSQSRSLLIACASENSDDFILQLVSDLHSSSLDDQKQAALEIRLLAKNKPENRLKIAKAGAIKPLISLISSPDMQLQEYGVTAILNLSLCDENKELIASSGAIKPLVRALKTGTPTAKENAACALLRLSQVEENKIAIGRSGAIPLLVNLLENGGFRGKKDASTALYSLCSTKENKIRAVQAGIMKVLVELMADFGSNMVDKSAYVLSVLISVPEARTAMVDEGGIPVLVEIIEVGSQRQKEIAVVTLLQICEDSVTYRTMVAREGAIPPLVALSQSGTNRAKQKAESLIELLRQPRSGNVAGRTSQVPA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1804 353 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 103 145 IPR000225 GO:0005515
Bisa09g1804 353 Gene3D - 23 198 IPR011989 -
Bisa09g1804 353 FunFam U-box domain-containing protein 4 47 351 - -
Bisa09g1804 353 PANTHER U BOX DOMAIN-CONTAINING 64 337 - -
Bisa09g1804 353 Gene3D - 202 340 IPR011989 -
Bisa09g1804 353 SUPERFAMILY ARM repeat 60 336 IPR016024 -
Bisa09g1804 353 SMART arm_5 256 296 IPR000225 GO:0005515
Bisa09g1804 353 SMART arm_5 174 214 IPR000225 GO:0005515
Bisa09g1804 353 SMART arm_5 298 338 IPR000225 GO:0005515
Bisa09g1804 353 SMART arm_5 215 255 IPR000225 GO:0005515
Bisa09g1804 353 SMART arm_5 133 173 IPR000225 GO:0005515
Bisa09g1804 353 SMART arm_5 92 132 IPR000225 GO:0005515
Bisa09g1804 353 Pfam Armadillo/beta-catenin-like repeat 93 131 IPR000225 GO:0005515
Bisa09g1804 353 Pfam Armadillo/beta-catenin-like repeat 176 214 IPR000225 GO:0005515
Bisa09g1804 353 Pfam Armadillo/beta-catenin-like repeat 134 172 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1804 Bisa-ChrBisa09 28078987 28080620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1804 63 347 U-box Gene Family AT2G23140 52.982 1.09e-89 280