Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1792 ATGGTGGTTAAGGAAGTCACGAACTTGTCAAATTTGGAGGACGAGGATGACCTTGACGAAGAGCCCGGGGAAGTGATCGAGTCGGCACCGCCCCAAAGGGTTGGCGAAGAGAGGGAACTCAGTAGCTCCCATATCAAGAAGAAGCTCCTCAAGGCCGGGCATGGATGGGAGACCCCCGAGCTCGGTGACGAAGTAACTGTTCACTATGTGGGGACTTTGTTTGATGGAACGAAGTTCGATTCTACTAGAGATAAGGGTGAACCTGTTACATTTGCACTCGGTCAAGCTCAAGTGGTTGCTGGGTTAGATCATGGGATTATCACCATGAAAGAGGGGGAGGTCGCGTTATTCACATTACCTGCTGAGTCGGGCTATGAAGTTGGAAATTCCGGAGGTATTCCACCCAATTCAGTTATTCAATTTGAGGTTGAACTCATTTCGTGGATCAGAGTGGTGGATATTAGCAAAGATGGTGGGATCATCAAGAAAATTATGGAGAAGGGGAGCAGAAATGGGCGACCCGGTAATCTAGATGAAGTTCTTGTGAAGTACCAAGTGGCTCTAGTTGATGGCACTATTGTTGCAGAAACACCAGAAGAGGGAGTCGAATTCCATGTAAAAGATGGTCATCTGTTTCCAGGATTGCCAAAAGTAATCATGACTATGGAAAGGGGAGAGAAGGCTAAGTTAATTGTTCAACCTCAGTATGCGACTGGGGAGAAGGGGAGAGTATATGGCAGCGGGGTCTATTCAATCCTGCCAAATTCAGTGCTTCACATTAATATTGAGTTGGTGTCCTTCAAGCCTGTTATTAATGTTACTGGTGACTCCAAGGTTCTTAAGAAGATTCTAAAAGAAGGGGAGGGTTCCCTCACTGCCAATGAGGGTTCTACTGTTACAATTAGCTATGTAGCAACTGTAGAAGATGGTACTATATTTGAGAAAAGAGGAATTGATGGAACAAAGCCCTTAGAATTTATAACTGATGAAGAACAAGTAATTGTTGGTCTAGATAGAGCGGTGGCAACAATGACGAAGGGCGAGAGGGCCAGAATAAGTATACAATCTGATTATGCATTTGGAAATGTTGAAGCAAGATGTGATTTGGCTATTGTTCGGCCAGGGTCCAGTGTAGTCTATGAAGTTGAGATGATAGATTTTATTAAGGAAAAAGCACCATGGGAATTGAATAATAATGAGAAAATTGAGGCAGCTGGGAAGAAGAAAGAAGAAGGAAATCTATTATTTAAAAGTGGCAAGTATCAAAGAGCAGGGAAGACGTATGACAAGGCTGCTGATTATGTTAGTGAAGATGGATCCTTTGGGGATGATGAGCAAAAGCTAGCTAAGATACTCAGAGTGTCATGCTGGTTGAATGGTGCAGCATGTAGCCTCAAACTTAATGACTTTCCGGGAGCAATCAAGTTATGCTCACAAGTGCTTGATGTTGAGTCCAGCAATGTGAAAGCTTTGTACAGACGAGCTCAAGCGTATATAGAAACTGGAGACTTTCTTTTGGCAGATGTAGACATCAAGAAGGCTCTTGAGGCAGACCCACAGAACAGGGAAGTAAAGGTGATACAGAGGAAATTGAAGCAACTTCAGGCTGAGAATGACAAAAGAGATGCTAAGCTCTATGCAAATATGTTTGCACATAAAGAGAGAGACTTTTCTGGGCGAACAAAGAGAATGAAGGTTGAGAAAACCGAGGATGAAAGGAAAGATGAAGAGCTCGTGAGAATAGAAGAACGTGACAAAGCTGCAGACAGTGGAGCTCCTCCTGATGGTGTTTGA 1794 0.437 MVVKEVTNLSNLEDEDDLDEEPGEVIESAPPQRVGEERELSSSHIKKKLLKAGHGWETPELGDEVTVHYVGTLFDGTKFDSTRDKGEPVTFALGQAQVVAGLDHGIITMKEGEVALFTLPAESGYEVGNSGGIPPNSVIQFEVELISWIRVVDISKDGGIIKKIMEKGSRNGRPGNLDEVLVKYQVALVDGTIVAETPEEGVEFHVKDGHLFPGLPKVIMTMERGEKAKLIVQPQYATGEKGRVYGSGVYSILPNSVLHINIELVSFKPVINVTGDSKVLKKILKEGEGSLTANEGSTVTISYVATVEDGTIFEKRGIDGTKPLEFITDEEQVIVGLDRAVATMTKGERARISIQSDYAFGNVEARCDLAIVRPGSSVVYEVEMIDFIKEKAPWELNNNEKIEAAGKKKEEGNLLFKSGKYQRAGKTYDKAADYVSEDGSFGDDEQKLAKILRVSCWLNGAACSLKLNDFPGAIKLCSQVLDVESSNVKALYRRAQAYIETGDFLLADVDIKKALEADPQNREVKVIQRKLKQLQAENDKRDAKLYANMFAHKERDFSGRTKRMKVEKTEDERKDEELVRIEERDKAADSGAPPDGV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1792 597 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 385 IPR001179 GO:0003755
Bisa09g1792 597 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 176 265 IPR001179 GO:0003755
Bisa09g1792 597 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 57 146 IPR001179 GO:0003755
Bisa09g1792 597 Gene3D - 35 151 IPR046357 GO:0003755
Bisa09g1792 597 FunFam Peptidylprolyl isomerase 393 548 - -
Bisa09g1792 597 Gene3D Tetratricopeptide repeat domain 391 548 IPR011990 GO:0005515
Bisa09g1792 597 Gene3D - 270 390 IPR046357 GO:0003755
Bisa09g1792 597 MobiDBLite consensus disorder prediction 561 590 - -
Bisa09g1792 597 Pfam Tetratricopeptide repeat 489 521 IPR019734 GO:0005515
Bisa09g1792 597 Gene3D - 152 268 IPR046357 GO:0003755
Bisa09g1792 597 SUPERFAMILY TPR-like 400 551 IPR011990 GO:0005515
Bisa09g1792 597 PANTHER PEPTIDYLPROLYL ISOMERASE 37 146 - -
Bisa09g1792 597 Coils Coil 517 544 - -
Bisa09g1792 597 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 149 IPR001179 GO:0003755
Bisa09g1792 597 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 296 388 IPR001179 GO:0003755
Bisa09g1792 597 MobiDBLite consensus disorder prediction 561 597 - -
Bisa09g1792 597 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 268 IPR001179 GO:0003755
Bisa09g1792 597 FunFam Peptidylprolyl isomerase 269 390 - -
Bisa09g1792 597 SUPERFAMILY FKBP-like 42 147 - -
Bisa09g1792 597 ProSiteProfiles TPR repeat profile. 488 521 IPR019734 GO:0005515
Bisa09g1792 597 SMART tpr_5 488 521 IPR019734 GO:0005515
Bisa09g1792 597 SMART tpr_5 405 438 IPR019734 GO:0005515
Bisa09g1792 597 SMART tpr_5 454 487 IPR019734 GO:0005515
Bisa09g1792 597 SUPERFAMILY FKBP-like 274 405 - -
Bisa09g1792 597 MobiDBLite consensus disorder prediction 1 40 - -
Bisa09g1792 597 SUPERFAMILY FKBP-like 153 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1792 Bisa-ChrBisa09 27877044 27883558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1792 33 551 Calmodulin-binding Proteins AT3G25230 54.702 0.0 560