Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1782 ATGAATGACAATAACAGCAGCGATAGGAATAATCATAACAGGAAAATGGAGGTTACTTATGTCGCTCCTCATCATCACTACCATCATCATCATCATCATCAACCCCAACCGTCTGATTCTGCTACACTTGCTGTTCCCACTACTTTCTGTTATGGTTTTGGGGAAAATAGTAACGCTGTCTTTCATTCTCCATTGACTGCAATGCCCCTCAGGTCTGATGGCTCACTCTCTGTAATGGAACCTCTCACTCTCATTGGATCTCAAACTGAAGAAGCCTTGAGGCAACAGGGCCACGTCACCCTCCAGACTCATCCATACTATTTTGGAGTTGCTTCCCATGGGATCTACGAAAGCAAGCACACTCAAACCGCAGAGGCAAACATTGGAGGCACCGAAAACTGTGTCGGAGGAGATATACAGTCGCTAAGCTTATCCATGAGCCCTTCTTCTCAGTCTAAAAAGAGAGCCTCTGTTAAGTTGGGACAGAGGCAGCCTGTCCATAGGAAGTCCATAGACACTTTTGGCCACAGAACTTCACAGTATAGAGGCGTCACCAGGCACAGATGGACAGGTAGGTATGAGGCACATTTGTGGGATAACAGTTGCAAGAAGGAAGGCCAGACCAGGAAGGGAAGACAAGTAATTCTGACATGTTCAGTGTTCATTCCTGGGGATGACAATGACGATGGCGATTCAATGCAATGGGGATATGATATGGAAGAGAAAGCTGCTAGAGCCTATGATCTTGCAGCTCTAAAGTACTGGGGACCTTCAACCCATATCAACTTTCCGTCAGAGAATTACCAAAAGGAACTTGAAGAAATGAAGAACATGACCCGGCAAGAATACGTTGCCCACTTGAGAAGAAAAAGCAGTGGGTTTTCAAGAGGGGCTTCAATCTACAGAGGCGTGACAAGACACCACCAACAAGGAAGATGGCAAGCAAGAATAGGCAGAGTTGCAGGAAACAAGGACCTTTATCTTGGCACATTCAGCACACAGGAGGAAGCAGCAGAAGCATATGACATAGCTGCAATCAAATTTCGTGGAGCAAATGCAGTGACTAACTTTGACACATGCAGATATGATGTTGAAAGGATCATGAGCAGCAATACCCTGCTTTCTGGGGAGGTAGCAAGACGAAGCAAAGCAACAAAGCAGAGCAAAGGGGTAGGAGAAGAAGCTCTTGAAGCTGAAAACAAGAGTGAAAAGGGTTGGGAGTGGAAGAAGATGGGTGTGTGTGAATCTCCTCAGAAAACCATGAAGAGCGGGAATTGTAGAAACAGTGCATTCTCAGGGGCCCTACAAGATCTCATGGGGATTGATTCTGTTGACGACTCTACCAAGAGAGGGACTCATTTTTCAAACCCATCCTCGCTGTTCACCAGTTTAAGCAGCTCAGGAGAAGATAGTCCACACAAAAATGGACCCACACTACTCTTTCCCGATCCCACAATGCCATCAAATATCGTTAGTCCCCTTGCTACTTCTTGGTTTCCTTCTCCTTCTACGGCATCTCACTTGCCACTGTTTGCTGCATGGAATGATACCTAA 1554 0.4601 MNDNNSSDRNNHNRKMEVTYVAPHHHYHHHHHHQPQPSDSATLAVPTTFCYGFGENSNAVFHSPLTAMPLRSDGSLSVMEPLTLIGSQTEEALRQQGHVTLQTHPYYFGVASHGIYESKHTQTAEANIGGTENCVGGDIQSLSLSMSPSSQSKKRASVKLGQRQPVHRKSIDTFGHRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVILTCSVFIPGDDNDDGDSMQWGYDMEEKAARAYDLAALKYWGPSTHINFPSENYQKELEEMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDTCRYDVERIMSSNTLLSGEVARRSKATKQSKGVGEEALEAENKSEKGWEWKKMGVCESPQKTMKSGNCRNSAFSGALQDLMGIDSVDDSTKRGTHFSNPSSLFTSLSSSGEDSPHKNGPTLLFPDPTMPSNIVSPLATSWFPSPSTASHLPLFAAWNDT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1782 517 ProSiteProfiles AP2/ERF domain profile. 300 358 IPR001471 GO:0003700|GO:0006355
Bisa09g1782 517 SMART rav1_2 300 364 IPR001471 GO:0003700|GO:0006355
Bisa09g1782 517 SMART rav1_2 180 270 IPR001471 GO:0003700|GO:0006355
Bisa09g1782 517 CDD AP2 179 264 IPR001471 GO:0003700|GO:0006355
Bisa09g1782 517 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 135 438 - -
Bisa09g1782 517 MobiDBLite consensus disorder prediction 450 473 - -
Bisa09g1782 517 MobiDBLite consensus disorder prediction 448 482 - -
Bisa09g1782 517 Gene3D AP2/ERF domain 300 359 IPR036955 GO:0003700|GO:0006355
Bisa09g1782 517 Gene3D AP2/ERF domain 179 265 IPR036955 GO:0003700|GO:0006355
Bisa09g1782 517 SUPERFAMILY DNA-binding domain 299 358 IPR016177 GO:0003677
Bisa09g1782 517 MobiDBLite consensus disorder prediction 139 164 - -
Bisa09g1782 517 Pfam AP2 domain 300 350 IPR001471 GO:0003700|GO:0006355
Bisa09g1782 517 FunFam AP2-like ethylene-responsive transcription factor 299 360 - -
Bisa09g1782 517 SUPERFAMILY DNA-binding domain 237 265 IPR016177 GO:0003677
Bisa09g1782 517 CDD AP2 299 358 IPR001471 GO:0003700|GO:0006355
Bisa09g1782 517 PRINTS Ethylene responsive element binding protein signature 181 192 IPR001471 GO:0003700|GO:0006355
Bisa09g1782 517 PRINTS Ethylene responsive element binding protein signature 246 266 IPR001471 GO:0003700|GO:0006355
Bisa09g1782 517 ProSiteProfiles AP2/ERF domain profile. 180 264 IPR001471 GO:0003700|GO:0006355
Bisa09g1782 517 MobiDBLite consensus disorder prediction 139 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1782 Bisa-ChrBisa09 27704055 27706797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1782 47 382 AP2-EREBP Transcription Factor Family AT4G37750 53.241 1.06e-129 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa09g1782 AP2 4.5e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0117 05 1851037 1854235 Bisa09g1782 09 27704055 27706797 CCT
Bisa09g1782 09 27704055 27706797 Bisa09g1782 09 27704055 27706797 ECH