Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1781 ATGGTTTCGAAGCAAGATTTGGTGGGGTCCTTTTCTGGGGACCATGAAGTGCACTGCACAGAACTGTGTGGTTTATCAAGCATGATGGAGCTAGCTGTTAGCAAATCCCATGGTTTGTGTATTTCGCTTTATGCTCTGAAAGGTTCGCTTTCCTGTCTGGGCATTATGATGGGTGGTCATGAAAATGTAAATGCCATGGGGTTTCCACCATCATCCAATGTTTCAGATTTATGCAATCCTTTTCTTGGTTCATCATCTACCTGGGATCATCCACTTGCTTCATTGAATCAAGCTCAAAGCTTTGGAGGCTCTTCAGTGGTTTCTCAGAGTGAGTTTGCTACCCCATCTTACCCTGTTGGTTTGGAAAGTCAGGGAATGAGTATGAGTAGCACCTCACAGTTTGTTCAGTATATGTCTGACTCAAATTATGCGGACATGGTCCCAAAGGTTCCCTCCTATGGAAGTGGTGATATAGCTAACACAGGGTACGTGTCTAATTATTATACAATCAAGGAACCAGGCATTGAAAGGGCTTCAATAAATGAGGCACAAACACAATCTCGGGGAGAGAATTCAGAAGAGGGAGACACTGCATCGGCATCTCATGGAAGTAGAAGAAAGAGAGGGCTTGATTGTAATTCTATGTTCAATCCAAATAAGAGCTCTGAAGAGGAAGCACTGAAGGATTCATCTGAACAAGATGAAAAGAAGCTAAAATTAGATCAAAATACAAATGCTGATCTGCGTGGGAATCAGTCAGTGAAGCAAGCTAAGGACAACTCTCACAGTGGAGAAACTCCCAAACAGAATTTCATTCATGTGAGGGCGCGAAGAGGTCAAGCTACGAATAGTCATAGCCTTGCAGAGAGGGTGAGAAGAGAAAAGATAAGTGAGAGAATGAGGTTACTTCAAGAACTTGTTCCCGGATGCAATAAGATAACTGGCAAAGCAGTAATGCTTGATGAAATTATTAACTATGTGCAATCACTGCAACAACAAGTTGAGTTTTTGTCCATGAAACTTGCCACTGTGAATCCTGAACTGAGTTTTGATTTAGAGCGGATCTTATCCAAAGATATTCTGCAATCGCGTATTGGACATGGAACAATGGGTGGATATGGCGCCGGTATCATCAACACAGGTCACCTATTCCACAGTGGAAGTTTTCAGGGAACCATGGGAAGCACACCCAGCACATCACCTCATATCCCTCCTTTGCCTCAGAATGCCACAGACCATGAGCTCCAAAGGTTATATGGAAATGGAATGGGATATGATTCTAGTACAGCCCTCCAAGATATGGGACCCAATGGTTGGAGGATGCGTCGTCTTAGAATTTTGCAGTTGATATTAGCTGAGGCTGAATACTGTAGAATAAAGGTTCAGCAGTATGGCATCTTAATTAGCCGTTCTTTGGCCCAAAAGTGCATTGTCATTTTGCAGGAAAGCAGTTCAAGTGAACTTGAAACTTGCAAGTTTACTATATGA 1488 0.4274 MVSKQDLVGSFSGDHEVHCTELCGLSSMMELAVSKSHGLCISLYALKGSLSCLGIMMGGHENVNAMGFPPSSNVSDLCNPFLGSSSTWDHPLASLNQAQSFGGSSVVSQSEFATPSYPVGLESQGMSMSSTSQFVQYMSDSNYADMVPKVPSYGSGDIANTGYVSNYYTIKEPGIERASINEAQTQSRGENSEEGDTASASHGSRRKRGLDCNSMFNPNKSSEEEALKDSSEQDEKKLKLDQNTNADLRGNQSVKQAKDNSHSGETPKQNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELSFDLERILSKDILQSRIGHGTMGGYGAGIINTGHLFHSGSFQGTMGSTPSTSPHIPPLPQNATDHELQRLYGNGMGYDSSTALQDMGPNGWRMRRLRILQLILAEAEYCRIKVQQYGILISRSLAQKCIVILQESSSSELETCKFTI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1781 495 Gene3D - 277 350 IPR036638 GO:0046983
Bisa09g1781 495 MobiDBLite consensus disorder prediction 181 198 - -
Bisa09g1781 495 MobiDBLite consensus disorder prediction 222 243 - -
Bisa09g1781 495 CDD bHLH_AtBPE_like 270 355 - -
Bisa09g1781 495 FunFam Basic helix-loop-helix transcription factor 277 349 - -
Bisa09g1781 495 Pfam Helix-loop-helix DNA-binding domain 283 331 IPR011598 GO:0046983
Bisa09g1781 495 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 280 330 IPR011598 GO:0046983
Bisa09g1781 495 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 185 392 IPR024097 GO:0006355
Bisa09g1781 495 MobiDBLite consensus disorder prediction 181 268 - -
Bisa09g1781 495 SMART finulus 286 336 IPR011598 GO:0046983
Bisa09g1781 495 MobiDBLite consensus disorder prediction 244 268 - -
Bisa09g1781 495 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 278 347 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1781 Bisa-ChrBisa09 27670522 27675800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1781 219 438 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 55.507 6.33e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa09g1781 HLH 5.5e-06 No_clan