Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1770 ATGACTTCTCATACCCTACAACGGCAGAACAAATATGGTTTCATAGCAAAATCTTCAGATGCACCAATTCTTTGTTCTGGTTGTGGGACAAGGACTGAATTGTATACTAAGGAGTCAATGAGGTTCAACTATTCTGAGATACTACAAGCGACCAATGATTTCTCAAAGGATAACTTGTTAGGTGAAGGAGGGTATGGCCACGTGTACAAGGGTATCCTTAAAGATGGACAGCAGATTGCTGCAAAGGTTAGAAAACAAGAAAGCAAACAGGGTTTTTCTGAATTTCATTCTGAGGTTTATGTCTTGAGTTTTGCTCGACACAAGAACATAGTGATGCTGTTGGGTTATTGTTGCAAAGAAAGGGAAAATATTTTGGTATATGAATATATTTGCAACAAGTCCCTTGACTGGCATTTATTTGAAAAAGACGCTACAGTTCTTGAGTGGCACCAAAGATATGCTATCGCCATTGGAACAGCAAGGGGATTGCGCTTTCTCCATGAAGAATGCCGTGGGGGTCCCATTATTCATCGCGACATGCGACCAAGCAATATTCTTCTTACTCATGATTTTGTCCCCATGCTAGGAGACTTTGGGCTTGCCAAATGGAAGACTGGTAGTGATCATGATACGATGCAAACGAGGGTAATGGGCACATTAGGGTACCTTGCTCCTGAGTATGCCGAAAATGGTCTTGTTTCTGTACGGACAGATGTGTATGCTTATGGCATTGTTCTGTTACAATTGATCTCAGGACGCAAAGTGGGCATCACCGATGATCCGCACCAACTATCTCTCCGACATTGGGCTGAGCCATTGATTGAGAAGCTGGCTTTGCACGAACTCATTGACCCTCGGCTTGGGCAATCATTTGTCATGTATGAAGTATACCTTGTGGCAAAAGCGGCATACTTCTGTGTGCAAAGAAAACCTGAGATGCGACCATCAATGGCAGAGTGCTGCATTCCAATGAATAGCTTGGCACTTCAGGTTGTGCACCTTCTTGAAGGAGAAAATGATCGCTTCAATATCGTGGCAGATCAGTTCCTACCCAATTACAAAAGTGAAGAAAAGGTTGACCTTTAA 1086 0.4291 MTSHTLQRQNKYGFIAKSSDAPILCSGCGTRTELYTKESMRFNYSEILQATNDFSKDNLLGEGGYGHVYKGILKDGQQIAAKVRKQESKQGFSEFHSEVYVLSFARHKNIVMLLGYCCKERENILVYEYICNKSLDWHLFEKDATVLEWHQRYAIAIGTARGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGSDHDTMQTRVMGTLGYLAPEYAENGLVSVRTDVYAYGIVLLQLISGRKVGITDDPHQLSLRHWAEPLIEKLALHELIDPRLGQSFVMYEVYLVAKAAYFCVQRKPEMRPSMAECCIPMNSLALQVVHLLEGENDRFNIVADQFLPNYKSEEKVDL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1770 361 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
Bisa09g1770 361 ProSiteProfiles Protein kinase domain profile. 54 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1770 361 Gene3D Phosphorylase Kinase; domain 1 24 129 - -
Bisa09g1770 361 ProSitePatterns Tyrosine protein kinases specific active-site signature. 175 187 IPR008266 GO:0004672|GO:0006468
Bisa09g1770 361 Pfam Protein kinase domain 55 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1770 361 Gene3D Transferase(Phosphotransferase) domain 1 130 345 - -
Bisa09g1770 361 FunFam Lectin-domain containing receptor kinase A4.3 130 337 - -
Bisa09g1770 361 PANTHER OS01G0750732 PROTEIN 30 337 - -
Bisa09g1770 361 SUPERFAMILY Protein kinase-like (PK-like) 38 322 IPR011009 -
Bisa09g1770 361 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 26 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1770 Bisa-ChrBisa09 27520201 27523672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1770 14 327 Trihelix Transcription Factor Family AT5G38560 42.202 1.20e-81 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Bisa09g1770 Pkinase 7.2e-39 CL0016