Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1728 ATGAAAATGCTGCAAACTGGACCAGCCGGAGAAGCCCACGACGGCAAATCCGGTGGCCGGACGGTGGTGGTGGGGATGAAGTTGGACTCGCCCAGTAAAGAGCTGCTCACTTGGGCTTTGGTCAAAGTCGCTCAGCCTGGTGATGCTGTGGTTGCTCTTCATGTTCTTGGGAACAATGAAATCGTCAATCGAGATGGAAAACTGTCTCTTCTTTCGCTTGTCAACGCATTCGACTCTGTTCTTGCTGTTTATGAAGGTTTCTGCAATTTGAAACAGGTGGATCTCCAGCTCAAAATTTGCAGAGGTTCATCAGTGCGAAAAATTTTAGTCCGAGAAGCAAATGCTTCGTCTGCAACTCATATTATAGTGGGAACAGCACGAGGCCTCCACGCAATTTGCCCGCCTACCTCTGTAGCTAAATTCTGTGCTAAAAAGTTATCCAAAAACTGTTGTGTTCTTGCTGTTAACAATGGGAAAGTTGTGTTCAAGCGAGACAGCTCTCCAACAACCCCTTCTCACTTGCAAGGAATTGATCGTCATTGCAAAGCGGGATTGCTTGGTTCTATTCAACGGACATTCCATAAGAGTTCAAAAGTAGTAAATGATGACAATACAGGAAATATGCATGATAAGGTTATTCTGGATTCTAGAGAAACTTTTGTTCAGAAACCGAGCAGCTCAATATGTGATCCAATTTCTGCAGAAGAGTCTTCTGGTGATGGTGGTCCTAAGGAGAACGCTTTGGCTATAGTGCCTGTACAGAAAACTGAGGCAGCATCACGTACACCAACCTTTTCAGTGAGAGAACTACCTGAGATGAAACCCGGTTGGCCATTACTACAATGGACAATTTTATCTGACAGACAGTCTCCGGATGGATCGTTGGCTCGTGAGATATCGGTTGTCCAGTGGGCAATGCAGTTGCCCTGTAGAAATCTTTCATTTGTCACACATCATGATCAATCTCTAGCTTTAGATGGAGAAAGTGGAGCTCTTGTTCCAGTGAATGTTGAAATGGGGACTGCCGATTCTTCACCTGACTGGAGCATACCTAAAGAATTGGAGGATCTTCATGATAAATACTCATCCACTTGCAGATTGTTCGAGTACCGTGAACTTCTATTGGCAACATCAAATTTCTCACCAGAAAATTTGATTGGGAAAGGAGGAAGTAGTCAGGTTTATAGAGGTTGCCTTCCTGACGGCAAGGAACTTGCCGTTAAGATCTTAAAGCATTCTGATGATGTTCTAAAGGAGTTTCTATTGGAAATAGAAATCATCACTTCCTTGCATCATAAAAACATAATTTCCCTCCTGGGGTTCTGCTTTGAAGAAAGCAATCTTCTTTTGGTCTACGATTTTTTGTCCAGAGGGAGCCTTGAAGACTACCTTTATGGGAATAAGAAAAATCCACTTGTTTTTTGTTGGACTGAAAGATATAAGGTGGCAATGGGTGTTGCTGAGGCTTTGGATTATCTGCATAACAATGTCTCTCAATCTGTGATCCACAGGGATGTAAAGTCATCAAATGTATTATTATCTGAGGACTTTGAGCCCCAGCTCTCTGATTTTGGCCTTGCTAAATGGGTGTCAACCTCATCTTCCCACATAACCTGCACAGTTGTTGCTGGAACTTTCGGTTACTTGGCTCCTGAGTACTTCATGTATGGCACAGTGAATGATAAGATTGATGTCTATGCATTTGGCGTCGTACTCCTTGAGCTTCTTTCGGGAAGAAAACCCTTAGGTGGTGATTATCCTAAAGGCCAAGAGAGCCTCGTTTTGTGGGCATTTCCAATCCTAAATAACGGAAAGGTGTCACAATTGTTAGATCCAAGTTTAGGCGATAACTATGACCAGGATCAAATGGAGAGGATGGTGTTGGCAGCCACACTTTGCATCAGACGTGACCCAAGAACCAGGCCTCAAATCAGCCTTATTTCAAAGCTGCTTCAAGGTGATTGTGATGTGATCAAGTGGGCAAGATTAGAAATTAATGCTTCAGAGACACAGGGAATGCTTGACGGTGAAGCTTGCCCACCTTCAAATCTACAGTCACACCTTAATCTTGCACTGCTCGATGTGGAAGATGACTCATTCTCCATGTGTCGTTGGAGGACTACTTGA 2127 0.4368 MKMLQTGPAGEAHDGKSGGRTVVVGMKLDSPSKELLTWALVKVAQPGDAVVALHVLGNNEIVNRDGKLSLLSLVNAFDSVLAVYEGFCNLKQVDLQLKICRGSSVRKILVREANASSATHIIVGTARGLHAICPPTSVAKFCAKKLSKNCCVLAVNNGKVVFKRDSSPTTPSHLQGIDRHCKAGLLGSIQRTFHKSSKVVNDDNTGNMHDKVILDSRETFVQKPSSSICDPISAEESSGDGGPKENALAIVPVQKTEAASRTPTFSVRELPEMKPGWPLLQWTILSDRQSPDGSLAREISVVQWAMQLPCRNLSFVTHHDQSLALDGESGALVPVNVEMGTADSSPDWSIPKELEDLHDKYSSTCRLFEYRELLLATSNFSPENLIGKGGSSQVYRGCLPDGKELAVKILKHSDDVLKEFLLEIEIITSLHHKNIISLLGFCFEESNLLLVYDFLSRGSLEDYLYGNKKNPLVFCWTERYKVAMGVAEALDYLHNNVSQSVIHRDVKSSNVLLSEDFEPQLSDFGLAKWVSTSSSHITCTVVAGTFGYLAPEYFMYGTVNDKIDVYAFGVVLLELLSGRKPLGGDYPKGQESLVLWAFPILNNGKVSQLLDPSLGDNYDQDQMERMVLAATLCIRRDPRTRPQISLISKLLQGDCDVIKWARLEINASETQGMLDGEACPPSNLQSHLNLALLDVEDDSFSMCRWRTT 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1728 708 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Bisa09g1728 708 Pfam Protein kinase domain 383 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1728 708 Gene3D Transferase(Phosphotransferase) domain 1 455 661 - -
Bisa09g1728 708 FunFam Putative receptor-like serine/threonine-protein kinase 455 667 - -
Bisa09g1728 708 PANTHER OS08G0249100 PROTEIN 184 661 IPR046958 -
Bisa09g1728 708 Gene3D Phosphorylase Kinase; domain 1 350 454 - -
Bisa09g1728 708 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
Bisa09g1728 708 Gene3D HUPs 19 157 IPR014729 -
Bisa09g1728 708 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 349 454 - -
Bisa09g1728 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Bisa09g1728 708 CDD USP_Like 21 155 - -
Bisa09g1728 708 Pfam Universal stress protein family 20 149 IPR006016 -
Bisa09g1728 708 ProSiteProfiles Protein kinase domain profile. 380 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1728 708 SUPERFAMILY Protein kinase-like (PK-like) 361 649 IPR011009 -
Bisa09g1728 708 SMART serkin_6 380 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1728 Bisa-ChrBisa09 25975800 25979183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1728 367 647 Trihelix Transcription Factor Family AT1G68690 44.406 1.08e-74 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa09g1728 Pkinase 4.1e-44 CL0016