Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1727 ATGGTAGACGAAGCCACAGGTGGATCTGTTATTAAGCGGCATTTGCATTCTGAGTTTCCAATGCAGTCTGCTCCTGTGGAGCAGTCCAGTTCAGAAGTAGGTTTCAATGCGATGGACTCTAATGTTAACCTCTCTCATATGCTGGATGGTTGTAAGGATTTCTCCACAAATGGAGAATCTGGCTCTCCAAGCTATATTGGTGTTAAAGACATGCCCAGTGATTGTAGAGAGAGTGAATGTGAAAATGCTGATATGTTGCTAGTGGAGCAAACCTCAGATGATGATAGCCATAATTGTACCTATTCTTCTGAATCAGGTCATCCCTCCAGTGTTTCTATCTGCAATAGCCCTTCAAAAGATTTTCTCCTACTCAATGATAATAATTGTTCTATCAATTATAATAGCATTATGGGCGATTTTGGACAGAATGCTAATGAAAGAAAGAATATTGTCAAAGTTGATTGTGTCATTGAAAGAAAATGTTCCGAAATTGTATTATTGCCTTCTCAAAGGAACAGTAGACGAAGGGAATCTGATTTTAAGCCAAGGGCTCCAAGAAAATGCACTAACCAAGCCAATGTGCCTCAATTGGGGTGGGGTATGAAGACAATCTTAAAGGCCACTAGAAAGAAAAGAAGCTGTATCTCCAAACCAGATTGCTCTTCTGGCTGGGGTTTGCTGGGGAACATTAAACAGGATAGTGAGTTAGGGGTAAATGAATTTGTGTCTGAAGGAATGGGAAAGGCTAGGGGCAGTTGTCAAAGTAGCATAAGCATAACAAATAAAAATTGTGCAAATTCTAGCACATTGAGTTCAATGCAGAATTGCAGTGCTTCAACTACTCGTTTTCGTTTGAAGATCAAAATGGGGAAAGGATTTGATTTAATTTCCCCAAATGTCTTGGTTCCAGAAGCTGTTGATGGCTCACCTTTTGCTTCCTATTTGGGACCTGGTTTGGGTTCTCAAAAATTAGCCAGCAATGCTGGAGATAAACTTTCAGAAGAGTTGGCTGTGGGCAAGTTTGAAACTTATAAAAATAATCCAAATGAGGATGCTGTTTTTCTGATTGGACAAATTGCCAATAACCACTTAGAAAGTACCACACTGATGGAGAAATCAGATGGTGATGCAAAGGAACTTTGTCTTGTGGTTCCTTCAATGAGTTTGGATGATGCATTGATAGGGCCTGTCAATATTAAAGGTATGGATCCTGGAATAGGAACTTCACCTAACTCAGAAGTGATTGATTTAATTCCTGAAATCCAGGTGGGTGAAAGACATCAAGAGGGTCTGAATGATGCTGATATAGGTTCTTCCGAGGAATGTAATTTTGCTGTCTATGATACTGGCTGCAAGAATAGGAAGAAGAAAGACAAGAATACTTGTTCAACTAATTGCAGTATCGAAGATGGATCGTGGGGTCCATTGAGGAAAAATAAAGCTAAGTGCTCAAAGAATCATGGATGTAAGAAGAATTTCACTGATGCGGTCAGCTCTATTGAATTGCCGACTTCCACTGATATAAAGACATTAAGCAATCCAATAAACTGTGGAGAAGTACACGCAGAACCATTGCGCCTTTCTGGAGAGGTTGGACTTGGAGACTTAACTGATGCTTTGAGAGTCAAAAGTAGCATGGAGACACATTGCAGCCTAGACATTAACAATGGAAATTCAGAATCCCCTGGTTTTGAGAATTTGCTTTCTTGTGAGAGACCTTTTGGGTATAACCTTCCCAAAAGTCTTAAATCTAGTAAAGTCAGCAAGACAAAATTTAAAACTTCTGAGTCAAAGAGCAGGAAAAAGACTCCTTGCAGACACAGGGAGAAAATGCAGAGACCTGTCAACTGTTGTGACGTTAAGCGAAAAGGTGTCTTTGATAAAGTTACATGTGAAGTCGCAGATTGCCTACTTACAGAAAATTGCGTTGATGGAAAGCATGAGTTGGATTCTGTCGGAAAAATTAATGCGGGTGATAACAAAATATCAGTCAATGTATCTAATTTGGACGTAGTGCCAGGTGTTGGTTTAGCCGAGCGGCATCTGTCACCACATAATGCATGGGTGCGTTGTGATGATTGCCACAAGTGGCGGCGAATTTCAGTTGCTCTTGCAGACCTAATTGAAGAAACAAACTGCTCCTGGACATGTAAGGACAGCAATGATAAAGCCTTTGCTGATTGCTCTATCCCTCAGGAAAAGTCAAATGCTGAGATCAATGCAGAGTTGGGGTTATCAGATGCTTCTGGTGAAGAGGATGCTTATGAAGACCGTAAAAAGTATAAGGAGTTGGAACATCAACGCCCATTGTTTCCCCAGGAGTCAACTTTTACGTGCATTTCTACCAATGAATTCCTGCACCGTAGCCACAAATCTCAGACTATCGATGAGATAATGGTTTGCCATTGCAAACCACCTCCAAAAGGTCAGTGGGGTTGTGGAGATGAATGTCTAAACCGAATGCTTAACATTGAATGTCTTCAAGGAGCCTGTCCATGTGGGGATCTTTGTTCGAATCAACAGCTCCAGAAACGCAATTATGCCAGACTGAAGTGGTTTAAATGTGGGAAAAAGGGTTATGGGCTCAAGGTGCTTGAAGATATATCCAAAGGGCAGTTCCTTATTGAGTATGTTGGAGAGGTGCTTGATGTGCATGCTTATGAGGCACGACAAAGAGAATATGCTTTGAAGGGTCATAGACATTTCTACTTCATGACCTTGAATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGTACAGAAAAGGAAGAAGAGGTGACATTTGATTACAACTATGTTAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTACTGTGGTTCACCTCAGTGTCGAGGTTATATAGGCAGTGATCCACATAATGCTGAAAATATTCTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCTGTGATGCTTACTGAAGATGGTGAAATCGAAGACGGTACGCCTGGAGCCAACTACTGTGATAATGTTGATATGCAGACTGCTAGGCATAAATTAAAAGATAGGAATTTATCTGACAACCCTACAGCTGCTATAAGGCCAGATAATGGGCCAGAGAAGGAGAGATCTCTGAGCGATGCCTCTGCTATCTCCCAGTTGCGAAGCTCATTAGAAAGGGAAGACTCAAAGGGCAATTTACTATCTTCTGTTCAAGTGAAAGAACTTTCCCAACAAATGGAGGATGTAACAAGAAAACCCATGCCTGTTGTACAACAAGGATACACAGTAGAATCAGAGCTTTCTGATAAAACTTTCTTGATTCAGAAATTAGAGACTTCCTCCACTTCATCTGTCAGCAAATCCAAGTCTAGAATAACTAAAGAGAGTTGTGGTCTGAAGAGTCCTGTTAAAAGGGGAAGGGCACGTGCTAATCCACCAAATGGCCTTAAAGCTGAGGTGACAATCAGCGGGTTGCATGCATCGTCCATCAAACATAAAAAAATAGTGGAAGGTTCCTCCAATGGCCGTTTTGAAGCAGTTGAGGAGAAACTTAAGGAGTTGCTGGATCCACATGGAGGAATAAGCAAAAGAAAAGATGCCACCAAAGGCTACCTAAAGCTTCTGCTTCTCACTGTGGCATCGAGTGATAGGAGTAATGGCGAAGCAATTCAAAGTTGCAGCAACCGAGATCTTTCTATGATTCTTGGTGCCCTTTTGGAAACAAGATCTAGAGCTGTGCTGAATGATATAATTAACAAAAATGGTTTACGCATGTTACATAATATAATGAAGCAGTACAGGCGAGACTTTAAAAAAATTCCGATACTACGAAAGCTCCTTAAGGTCTTAGAGCGCCTAGCAGAAAGAAAGATTTTGACATTTGAACATATTAACGGTGGTCCTCCTTGTCGTGGAATGGAGAGTTTTAGAGAGTCAATGCTGTCTCTGACGGAGCATGAAGACAAAGAGGTCCATCAAATTGCTCGAAACTTTCGAGATAGATGGATTCCTAGATCTCTCAGAAAACATGGCCATGTAGACAGGGATGATTTTAGAGTGGAATCAAACAGGAGATTGAGCTGCAACAGATTTTCAGCTTCACAGAACTATAGACATGAGCGGGATATAAGACCTACAGAAGCAATAGATTGCATCCAGCAGTCAATGGTTGTAACAAGTTCAGTCAATGCTGGTTCCCGTGAAGTTTGCTCTGCACCATCTCTGGATGGGTGTGAAATCAACGGGCGGAAAAGACGTAAATTTAAAAGCCGATGGGATCAACCAGCAGAGACAAATTCAGATATAGTATCTTATGAGAACAAGGAAGAAAAGGTTGTCTCGAGGCTGTCAAAGCAACCTGATGACTCTGTTAATGAAAGGCAGAACATTCCTGTGGATGTTCCACCTGGCTTTTCATCCTTATTGCAGCCTCGCTCGGGTTCTTCAAATGCGTCACTGAACTCTGGTGATCTTGCTCTGCAAAATGCAGGTCATTCTGGATGTCCCCTTGATGTAGTTATAGGTCATCCAAAGGAAAGATTCAACTCTCACTTGCCGGTCTCTTATGGGGTGCCATGGCCTGTTGTCCAGCAATATGGAACACCACATGCAGAAACTGCAGATAGTTGGGTCACTGCACCAGGCATGCCTTTCAGCCCGTTTCCTCCACCACCTCCATATCCCCGGGATGAGAAACACTGTCAACCCTTTAATACTACTAACCCTGCGAAAACAGATCAGCCTGCTGAAGTTATGCAGTGTGATACTGGTGGTCTAGTTAGTTGTTACTCGGATGATATGACTCCCAGCACAGCTGATGCTGATTCTGAAGACCTTTTATACGAGGATGACAGCCACATTCCCAAACGAGTGGAGGGTTCCCCTAATGATTTGGGAAGAAGTTACTTTAAGCAGCGGAAATGGAATAAATCAGAAATACCTCGACCATGGTCCAGGAGGAATTTATGGGGATGTGACGGGTAG 4992 0.4197 MVDEATGGSVIKRHLHSEFPMQSAPVEQSSSEVGFNAMDSNVNLSHMLDGCKDFSTNGESGSPSYIGVKDMPSDCRESECENADMLLVEQTSDDDSHNCTYSSESGHPSSVSICNSPSKDFLLLNDNNCSINYNSIMGDFGQNANERKNIVKVDCVIERKCSEIVLLPSQRNSRRRESDFKPRAPRKCTNQANVPQLGWGMKTILKATRKKRSCISKPDCSSGWGLLGNIKQDSELGVNEFVSEGMGKARGSCQSSISITNKNCANSSTLSSMQNCSASTTRFRLKIKMGKGFDLISPNVLVPEAVDGSPFASYLGPGLGSQKLASNAGDKLSEELAVGKFETYKNNPNEDAVFLIGQIANNHLESTTLMEKSDGDAKELCLVVPSMSLDDALIGPVNIKGMDPGIGTSPNSEVIDLIPEIQVGERHQEGLNDADIGSSEECNFAVYDTGCKNRKKKDKNTCSTNCSIEDGSWGPLRKNKAKCSKNHGCKKNFTDAVSSIELPTSTDIKTLSNPINCGEVHAEPLRLSGEVGLGDLTDALRVKSSMETHCSLDINNGNSESPGFENLLSCERPFGYNLPKSLKSSKVSKTKFKTSESKSRKKTPCRHREKMQRPVNCCDVKRKGVFDKVTCEVADCLLTENCVDGKHELDSVGKINAGDNKISVNVSNLDVVPGVGLAERHLSPHNAWVRCDDCHKWRRISVALADLIEETNCSWTCKDSNDKAFADCSIPQEKSNAEINAELGLSDASGEEDAYEDRKKYKELEHQRPLFPQESTFTCISTNEFLHRSHKSQTIDEIMVCHCKPPPKGQWGCGDECLNRMLNIECLQGACPCGDLCSNQQLQKRNYARLKWFKCGKKGYGLKVLEDISKGQFLIEYVGEVLDVHAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKEEEVTFDYNYVRVFGAAAKKCYCGSPQCRGYIGSDPHNAENILQGDSDEEFPEPVMLTEDGEIEDGTPGANYCDNVDMQTARHKLKDRNLSDNPTAAIRPDNGPEKERSLSDASAISQLRSSLEREDSKGNLLSSVQVKELSQQMEDVTRKPMPVVQQGYTVESELSDKTFLIQKLETSSTSSVSKSKSRITKESCGLKSPVKRGRARANPPNGLKAEVTISGLHASSIKHKKIVEGSSNGRFEAVEEKLKELLDPHGGISKRKDATKGYLKLLLLTVASSDRSNGEAIQSCSNRDLSMILGALLETRSRAVLNDIINKNGLRMLHNIMKQYRRDFKKIPILRKLLKVLERLAERKILTFEHINGGPPCRGMESFRESMLSLTEHEDKEVHQIARNFRDRWIPRSLRKHGHVDRDDFRVESNRRLSCNRFSASQNYRHERDIRPTEAIDCIQQSMVVTSSVNAGSREVCSAPSLDGCEINGRKRRKFKSRWDQPAETNSDIVSYENKEEKVVSRLSKQPDDSVNERQNIPVDVPPGFSSLLQPRSGSSNASLNSGDLALQNAGHSGCPLDVVIGHPKERFNSHLPVSYGVPWPVVQQYGTPHAETADSWVTAPGMPFSPFPPPPPYPRDEKHCQPFNTTNPAKTDQPAEVMQCDTGGLVSCYSDDMTPSTADADSEDLLYEDDSHIPKRVEGSPNDLGRSYFKQRKWNKSEIPRPWSRRNLWGCDG 1663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1727 1663 PANTHER SET DOMAIN PROTEINS 199 1434 - -
Bisa09g1727 1663 MobiDBLite consensus disorder prediction 1121 1151 - -
Bisa09g1727 1663 SUPERFAMILY SET domain 775 967 IPR046341 -
Bisa09g1727 1663 SMART set_7 848 952 IPR001214 GO:0005515
Bisa09g1727 1663 Pfam SET domain 859 938 IPR001214 GO:0005515
Bisa09g1727 1663 MobiDBLite consensus disorder prediction 1022 1051 - -
Bisa09g1727 1663 ProSiteProfiles Post-SET domain profile. 954 970 IPR003616 -
Bisa09g1727 1663 MobiDBLite consensus disorder prediction 587 606 - -
Bisa09g1727 1663 FunFam Histone-lysine N-methyltransferase 680 741 - -
Bisa09g1727 1663 SMART shorttest3 796 847 IPR006560 GO:0005634|GO:0042054
Bisa09g1727 1663 MobiDBLite consensus disorder prediction 1 24 - -
Bisa09g1727 1663 MobiDBLite consensus disorder prediction 1451 1492 - -
Bisa09g1727 1663 Gene3D - 678 741 - -
Bisa09g1727 1663 ProSiteProfiles Zinc finger CW-type profile. 682 736 IPR011124 GO:0008270
Bisa09g1727 1663 Pfam CW-type Zinc Finger 688 734 IPR011124 GO:0008270
Bisa09g1727 1663 MobiDBLite consensus disorder prediction 1477 1492 - -
Bisa09g1727 1663 ProSiteProfiles SET domain profile. 848 969 IPR001214 GO:0005515
Bisa09g1727 1663 SMART PostSET_3 954 970 IPR003616 -
Bisa09g1727 1663 Pfam AWS domain 811 845 IPR006560 GO:0005634|GO:0042054
Bisa09g1727 1663 ProSiteProfiles AWS domain profile. 796 846 IPR006560 GO:0005634|GO:0042054
Bisa09g1727 1663 Gene3D SET domain 742 986 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1727 Bisa-ChrBisa09 25959124 25971183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1727 831 969 C2H2 Transcription Factor Family AT2G23740 29.714 1.14e-14 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa09g1727 SET 1.9e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1727 09 25959124 25971183 Bisa09g1727 09 25959124 25971183 ECH