Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa09g1722 | ATGAGTTCCGTCACATTCACACATCCAAGTCACCATCATTATTCATCAGTGAAGCTTCTGAATACTGAACTCACTTTCCCGCGGCTGTGTTCCCTCCTCTTTTCATATCGCGTTACTGCGTGTTGTGTATTTCGCTTTCGGCAATTTCATCCCATAAACCTAATTGGCACTCCCAATCTCCCTCGGAAGACTGCACGGTGTGTGCGAGGGAGAGGGCTCGGTGGTGAAGTGAAGATGCTGAGGACGAACGCATTCAAGGGCGCGAATGTGTTCATGTCGCGGAACCTTGTGCCGCCGGAAGTCTTCGACGCACTTCATGACGCGCTCAAGAATAACGGTGCTCATGTCGAGCTTTGCTGCGACCCTTCGCGCAATGGGCCCGACGACTACCACATCATATCCCACGATCACGAGAAGCTGGAGGATCTTAAAGCCAGGGGCTGTAATCTGCTTGGCCCTCGATGCGTACTTTCATGTGCAAAAGAACAAAGACCTCTGCCTAAAAAGGGCTTCACTTGTTGCCTTGCCATGGATGGTGTCAAAGTACTTGCATCTGGCTTTGATATGGATGAGAAGGTTAAGATAGGAGAGTTAGTAACTTCAATGGGAGGAGTTCTACATACTAAAGCATCACTGGATGTCAACTTTGTCATTGTGAAAAACGTTTTAGCTGCAAAATACAAGTGGGCTTTGAATATGGTGAAGAAACCAATAGTCACTTTTAATTGGTTAAAGCAATGCTCTTTTGAGCATCGTGTTGTCCCTCAAGAGTCATACAGGGTTCTCCCTTTTTCTGGGTTGACAATTTGTGTTACCAGAATTCCAGCAGATGAGCGCAGAGAAATCGAGACGCTTATTATACAAAATGGTGGAAAATACTCTGCAGAGTTAACAAAGAAGTGCACGCATTTGATTTCTGATATATCCTTGCACATAGATTCTTTTTAA | 948 | 0.4557 | MSSVTFTHPSHHHYSSVKLLNTELTFPRLCSLLFSYRVTACCVFRFRQFHPINLIGTPNLPRKTARCVRGRGLGGEVKMLRTNAFKGANVFMSRNLVPPEVFDALHDALKNNGAHVELCCDPSRNGPDDYHIISHDHEKLEDLKARGCNLLGPRCVLSCAKEQRPLPKKGFTCCLAMDGVKVLASGFDMDEKVKIGELVTSMGGVLHTKASLDVNFVIVKNVLAAKYKWALNMVKKPIVTFNWLKQCSFEHRVVPQESYRVLPFSGLTICVTRIPADERREIETLIIQNGGKYSAELTKKCTHLISDISLHIDSF | 315 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa09g1722 | 315 | Gene3D | BRCT domain | 262 | 311 | IPR036420 | - | |
| Bisa09g1722 | 315 | FunFam | Transcription coactivator | 174 | 262 | - | - | |
| Bisa09g1722 | 315 | ProSiteProfiles | BRCT domain profile. | 177 | 261 | IPR001357 | - | |
| Bisa09g1722 | 315 | SMART | BRCT_7 | 82 | 163 | IPR001357 | - | |
| Bisa09g1722 | 315 | SMART | BRCT_7 | 261 | 315 | IPR001357 | - | |
| Bisa09g1722 | 315 | SMART | BRCT_7 | 174 | 252 | IPR001357 | - | |
| Bisa09g1722 | 315 | Gene3D | BRCT domain | 116 | 171 | IPR036420 | - | |
| Bisa09g1722 | 315 | Gene3D | BRCT domain | 174 | 261 | IPR036420 | - | |
| Bisa09g1722 | 315 | Pfam | twin BRCT domain | 181 | 243 | IPR001357 | - | |
| Bisa09g1722 | 315 | Pfam | twin BRCT domain | 267 | 307 | IPR001357 | - | |
| Bisa09g1722 | 315 | PANTHER | DNA REPLICATION REGULATOR DPB11-RELATED | 79 | 306 | - | - | |
| Bisa09g1722 | 315 | SUPERFAMILY | BRCT domain | 136 | 261 | IPR036420 | - | |
| Bisa09g1722 | 315 | ProSiteProfiles | BRCT domain profile. | 259 | 315 | IPR001357 | - | |
| Bisa09g1722 | 315 | SUPERFAMILY | BRCT domain | 263 | 307 | IPR036420 | - | |
| Bisa09g1722 | 315 | CDD | BRCT | 180 | 247 | - | - | |
| Bisa09g1722 | 315 | CDD | BRCT_TopBP1_rpt2_like | 263 | 307 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa09g1722 | 79 | 309 | Core DNA Replication Machinery Family | AT1G77320 | 74.569 | 4.13e-116 | 356 |