Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1721 ATGGGGAAATTGCAATCTGCAGCATCATCTGGGCCTCCTGATTCACATGCACCTGTTGTTTCTGGTGCTGAGTTTGTGGATAGAGATCCAGAAGCTACGCAGTCAGAAAATGTGACTTCTGCTCTGTTAGATGCTTCTATCCTTGTTAAAGAGACAGGTCCTGAAGCACCTCCAGTGCAAGCTAGTCATGAACCAATAGTTGATGGTGCTGTAGCCAATGATTCTGAATCTGATGGTAATGACCTGTACTTATCAGAGTGCAGAATATTACTAGTCGGCTTTGAAGCTTCTGAAATGCGCAAGCTAGTTAATATGGTTCGTAAAGGAGGAGGATCCCGATATATGTCTCTTAATGACAAGTTGACGCACATAGTAATTGGAACCCCTTCGGAAACGGAAAAGAAGGATGTAAGGAGTCTTGCTGCTTTGGGTGTCATCTATGTTGTTAAAAGAACATGGCTTGAAGATTGTGACCGTCAAAAGAAAGAAGTGCCTGTTCTTAGGAGGCACATTGCGCAAGATCTTCTACTGCCAAAAGCATGCTTTGCAAAAGGAGCACTAACAGGCATAATTGGCATGAATCATGGTAAAGGCTTCAGCACTCATCAAAGCTTGCAGGCTGATCAGGTAGGGGGTGGTATGGACTCAAGAGCTGTGATGCCATTATCAGTGGAGAACAAGAAAGAAATGAAGCAGGAGATTTGCTTAAATGATCAAACGTTTCTTAAATCAATGGGCAAATCTACACAGAAAACTCAACTTCCCATTGTTAATAATAAAATGAAGAGTCAACAGAAGATGCAAAATGAATCCATTTCTCAGTGTGTGAAGTCATCAACAGTTTTCAGAGGGAGGATATTTTGTTTTTCGAATTCTTTTCCTCAAGAAAGAAGAGACGAGATTGTTCAATGGATAAGTCAAGGGGGAGGAGAGGTAGTAAATGGGAAGAGGAAACAGAATGCCCACTATACTATTGAGTGTCATGGTGCAACGCCAAGGTTGGAAGATATTTCCCAAACTACATATATTTCCAGTCATTGGATACGAAATTGTTTAGAGGATGACTCCTTGCTGGATGTTGATAGTCACATTCTTTATTCTCCACTTCCCTGCCGTATACCCTTGCTTGGATTTGAAAGCTTTCGGTTTTGTGTTTCACAATACGAGGAGAAAGACAGAATTCTACTTAGGAACTTGTGTTTTGTTCTTGGAGCGAAGTTTGTGGAGAAGTTGACTAAGAAAGTCACCCATTTATTATGTAAATTCACCAATGGGCCTAAGTATGAGGCTGCTTGTAAGTGGGAGATTCAGTCAGTTACATCTGAATGGATATTTGAATGTGTCAAACAGAATAAAGTTGTTGCTGTTGATCAGTTTTTACCAAAAGAAGTCACAGCTCAAGACCAAGAGGCAGGAATTTGTACTGTGAGTCAATTTCCTACCCAGGCTGTTCGAGTGACCAGGGGAGACAGCTCCTCTGAATTTTCAAGTCAATTGCAAAGTTTGAGAAACACATCAAATCAAAATGTTGATAGTCGTGACAATTATGGGGTTGATGCAAAAATCTCAAGTAATAGCTGCAAAAGGGCAAGGCTTTTGGAAGAGCCTGGCCTATATGATAAGGTGCCTGCTGTTGTAGATTCAGTTACCCATATCCATGAAATGAATTCTACTGGAGGCAATATGTTAAAAGATATTAGTGAGGTTTCTCAAGCTGTTCCTGATGTCGCTGCTGCAATTGAGGATTTGTTAGAGCAGACTAGAAAGATGCATGACCAGAAGTCCCCAGGGAAGACGGTGAATGAGCGGAGTATTTTCTCGTCTGATTGTTCTGTCCTTGATGAAGACCAATCAAATCCTCATACTGTTATTGGGTTATCTAAACACTGGTTAAACAGAAGTAGCAGAAATGAGGATAATGATGATGCTTCTCGAGATGGAAGAGGAGGCATTTATGATAACTTCAGTGAAACACAAACAGAATCACAGGTTGTTGGTTATGAAGAAGATTTGTCTGGAAGGCAAATGCTTATCGACAGAGTCCGAACCCGAAGTAGCATGACTTGA 2067 0.4107 MGKLQSAASSGPPDSHAPVVSGAEFVDRDPEATQSENVTSALLDASILVKETGPEAPPVQASHEPIVDGAVANDSESDGNDLYLSECRILLVGFEASEMRKLVNMVRKGGGSRYMSLNDKLTHIVIGTPSETEKKDVRSLAALGVIYVVKRTWLEDCDRQKKEVPVLRRHIAQDLLLPKACFAKGALTGIIGMNHGKGFSTHQSLQADQVGGGMDSRAVMPLSVENKKEMKQEICLNDQTFLKSMGKSTQKTQLPIVNNKMKSQQKMQNESISQCVKSSTVFRGRIFCFSNSFPQERRDEIVQWISQGGGEVVNGKRKQNAHYTIECHGATPRLEDISQTTYISSHWIRNCLEDDSLLDVDSHILYSPLPCRIPLLGFESFRFCVSQYEEKDRILLRNLCFVLGAKFVEKLTKKVTHLLCKFTNGPKYEAACKWEIQSVTSEWIFECVKQNKVVAVDQFLPKEVTAQDQEAGICTVSQFPTQAVRVTRGDSSSEFSSQLQSLRNTSNQNVDSRDNYGVDAKISSNSCKRARLLEEPGLYDKVPAVVDSVTHIHEMNSTGGNMLKDISEVSQAVPDVAAAIEDLLEQTRKMHDQKSPGKTVNERSIFSSDCSVLDEDQSNPHTVIGLSKHWLNRSSRNEDNDDASRDGRGGIYDNFSETQTESQVVGYEEDLSGRQMLIDRVRTRSSMT 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1721 688 Gene3D BRCT domain 70 168 IPR036420 -
Bisa09g1721 688 SUPERFAMILY BRCT domain 377 462 IPR036420 -
Bisa09g1721 688 Pfam BRCT domain, a BRCA1 C-terminus domain 279 362 IPR001357 -
Bisa09g1721 688 Pfam BRCA1 C Terminus (BRCT) domain 81 157 IPR001357 -
Bisa09g1721 688 SUPERFAMILY BRCT domain 279 367 IPR036420 -
Bisa09g1721 688 MobiDBLite consensus disorder prediction 633 648 - -
Bisa09g1721 688 ProSiteProfiles BRCT domain profile. 79 171 IPR001357 -
Bisa09g1721 688 Gene3D BRCT domain 377 478 IPR036420 -
Bisa09g1721 688 Gene3D BRCT domain 273 371 IPR036420 -
Bisa09g1721 688 ProSiteProfiles BRCT domain profile. 277 365 IPR001357 -
Bisa09g1721 688 MobiDBLite consensus disorder prediction 1 36 - -
Bisa09g1721 688 ProSiteProfiles BRCT domain profile. 378 461 IPR001357 -
Bisa09g1721 688 MobiDBLite consensus disorder prediction 633 654 - -
Bisa09g1721 688 FunFam Transcription coactivator 61 171 - -
Bisa09g1721 688 FunFam Transcription coactivator 274 371 - -
Bisa09g1721 688 SUPERFAMILY BRCT domain 82 165 IPR036420 -
Bisa09g1721 688 CDD BRCT_TopBP1_rpt2_like 378 451 - -
Bisa09g1721 688 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 12 686 - -
Bisa09g1721 688 Pfam twin BRCT domain 382 443 IPR001357 -
Bisa09g1721 688 SMART BRCT_7 279 355 IPR001357 -
Bisa09g1721 688 SMART BRCT_7 375 451 IPR001357 -
Bisa09g1721 688 SMART BRCT_7 81 161 IPR001357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1721 20 688 Core DNA Replication Machinery Family AT1G77320 45.927 0.0 560