Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1716 ATGGCAATTATGAGTAAGCCATTCCTCTTCCTTTCCCTCCTCATCTTCGCCATCTCCTCTGCTTCTTCATCATTATCATTATCTTCTTCTTCTTCATGTCCCTTGGATCTCTCCTACGTCCTCACCTTCCCATGGGACACTTCATCTTGCCTCAACATAAACCCCAACAATGGAACTCAGCACTGTTGCCAAACCCTCCTTAGCGTCTTAGGTATAGGTCTCGCCCAACACCTCAAAAACACCTCCACCTTCGAACTTCCAGACAAAAACTCTTCCTCTTCCTGCCTCTCCGATTTCAGAACCAAGCTTTCAGCTTTATCAATCAACCCCTCTTTAGTTTCTTCCTGCTTCCCTAACTCCACCCAGTTCGTCACCAACTCTTCAAACTGCGCAGGAATCAGAACCACCCAGGACTTCACTTCAAAGGTTGGCTTAATGACCCCTTTAGACACAGCCTGTAATGGAGACCTCACGAAGGCCACTCGTTGCGGAATTTGCCTCGATGCTGGTTTGAAAGTGAACTCCCAGCTTTCTGCTATAGACCCAAATGCCACAAAGTGTTTTTACTTCACGATTTTGTATGCTGCTGCTATTGTTAACCAGTTTGGTCCAGAGGATGTAAGAACAGCTAGTTGTATTCTAGGCATGCCTCTGTCTAGTGCTGCCTACAAAGGGGGTTCTAACAGAGAACGCATGCTGAAGCTGGGTTTTGGATTGCTGGGTGCTTTAATTGGTGTTCTTCTTGCTTTTGTAATGATCATTATGTACAGAAAGTGGGATAGGAGACGGAGGGAGTATATTCACCACAGAGAAGTTGTAAGCAGTGTGAGGGCTAGTGTTTTGCCTTATACTGGTGCGAAATGGTTTCATTTGACAGAACTTGAGAGAGCCACTGATAGATTTTCACAAAAGAATGTGATAGGTCAAGGATCTGATGGGGTTGTGTATAAAGGGACTCTCCAAGATGGGACCTTGGTCGCAGTTAAAGAGATTTTTGATCTGGAAACAAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATTATCAGCAAAATCAAGCACAGGAATCTGGTTGCTCTGCGAGGTTGTTGTGTCACAAGTGATAATTCAAAAGGTAAGAGGAGGTTTCTGGTTTATGATTACATGCCTAATGGCAGCTTAAGTTACCAGTTATCTCTCTCTGGGGCTAATAGACTAACATGGCCACAGAGGAAGAACATAATCATCGATGTGGCCAAAGGGCTTGCTTATTTACATTACGAGATCAAACCCTCAATTTACCATCGCGACATAAAGGCCACAAACATACTCTTAGACTCATCAATGAAGGCCAAAGTCGCAGACTTTGGCTTGGCCAAGCAAGGAAACGAGGGCCAGTCTCATCTCACCACAAGGGTCGCTGGCACATACGGTTATCTAGCACCAGAGTATGCTCTCTACGGCCAACTTACAGAGAAAAGCGATGTTTACAGCTTTGGCATTGTGATTCTCGAAGTGATGAGTGGAAGAAAAGTGCTTGACACTTCAAACTCATCGGTTCTTCTCATCACAGACTGGGCTTGGACGCATGCAAAGTCAGGGAAGATAGAGGAGATCTTGGACGAGTCTATCAGAGAAGCAGGGCCTAAGAGGATAATGGAGAGGTTTGTGCGTGTGGGAATTCTCTGTGCTCATGTCATGGTGGCATTAAGACCTACCATTTCTGAGGCTTTAAGAATGTTGGAAGGTGACATTGATATTCCCAAGTTACCAGACAGACCAGTGCCTCTTGGTCATGAGTCGTTTCAGTCTTCTCTCTTCTATGGTTTGCCTCCAAGTGGAAGATCTACACCCTTCGGTTCATCCATTCAAGTATGA 1857 0.4513 MAIMSKPFLFLSLLIFAISSASSSLSLSSSSSCPLDLSYVLTFPWDTSSCLNINPNNGTQHCCQTLLSVLGIGLAQHLKNTSTFELPDKNSSSSCLSDFRTKLSALSINPSLVSSCFPNSTQFVTNSSNCAGIRTTQDFTSKVGLMTPLDTACNGDLTKATRCGICLDAGLKVNSQLSAIDPNATKCFYFTILYAAAIVNQFGPEDVRTASCILGMPLSSAAYKGGSNRERMLKLGFGLLGALIGVLLAFVMIIMYRKWDRRRREYIHHREVVSSVRASVLPYTGAKWFHLTELERATDRFSQKNVIGQGSDGVVYKGTLQDGTLVAVKEIFDLETKGDEEFCYEVEIISKIKHRNLVALRGCCVTSDNSKGKRRFLVYDYMPNGSLSYQLSLSGANRLTWPQRKNIIIDVAKGLAYLHYEIKPSIYHRDIKATNILLDSSMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEVMSGRKVLDTSNSSVLLITDWAWTHAKSGKIEEILDESIREAGPKRIMERFVRVGILCAHVMVALRPTISEALRMLEGDIDIPKLPDRPVPLGHESFQSSLFYGLPPSGRSTPFGSSIQV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1716 618 Gene3D Phosphorylase Kinase; domain 1 263 381 - -
Bisa09g1716 618 ProSiteProfiles Protein kinase domain profile. 301 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1716 618 PANTHER OS01G0750732 PROTEIN 47 582 - -
Bisa09g1716 618 SMART serkin_6 301 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1716 618 Pfam Protein kinase domain 302 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1716 618 Gene3D Transferase(Phosphotransferase) domain 1 382 580 - -
Bisa09g1716 618 Pfam SPARK 28 187 IPR043891 -
Bisa09g1716 618 CDD STKc_IRAK 307 576 - -
Bisa09g1716 618 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Bisa09g1716 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Bisa09g1716 618 FunFam Receptor-like serine/threonine-protein kinase At4g25390 266 381 - -
Bisa09g1716 618 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 382 582 - -
Bisa09g1716 618 SUPERFAMILY Protein kinase-like (PK-like) 285 591 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1716 Bisa-ChrBisa09 25822752 25824608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1716 22 596 Receptor kinase-like Gene Family AT1G11050 53.299 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Bisa09g1716 Pkinase 2.7e-45 CL0016