Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1704 ATGTCATGTTATGTCGTCATAGTATCAGCTTCTATATATTTAATTAGTTATGTGACAGTTATTGGTGCAATGAAACAGAAACCTGGGTGGAGGAAGTTCCTTGCATTCGTAGGTCCAGGTTTTCTGGTCTCCTTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTGACCACAAATTCGAGCTGCTGTGGGTGATTCTCATTGGGCTGGTCTTCGCCCTCATTATTCAGTCATTGGCAGCAAATCTTGGAGTCAGCACTGGTAAACACCTTTCAGAATTATGTAAAGCAGAGTACCCATTGATTGTGAAGTACTTCTTATGGTTGTTAGCCGAGCTTGCTGTCATAGCTGCAGACATACCCGAAGTAATTGGGACGGCCTTTGCACTCAACATACTATTCAACATCCCAGTATGGGGAGGAGTTCTATTGACTGGCTTCAGCACCCTCTTGCTTCTGGGTCTCCAGAGATTTGGGGTGAGGAAGCTGGAGTTACTGATATCGGCACTAGTATTCGTATTGGCAGGATGTTTCTTTGGGGAAATGAGCTATGTGAAGCCGCCAGCGTCAGGAGTATTGAAGGGGATGTTGGTTCCCAAACTCAGTGGTCACTCTGCCACTGGGGACGCCATTGCCCTTCTTGGTGCTCTTGTTATGCCCCACAACCTGTTCCTCCACTCTGCTCTCGTGCTCTCCAGAAGAATCCCCAACTCTGTGCGTGGCATCAATGAGGCTTGCAGATTCTTCCTGATCGAGAGCGGATTCGCACTCTTCGTCGCATTTCTCATCAACGTCGCAGTCATTTCCGTCTCCGGCACTGTTTGTTCAGCCACCAACATTTCCGATGAAAATGCAGATCGATGCAGCGATATCACCCTTAACTCCGCTTCTTTCCTTCTCCAGAATGTTCTGGGACGTTCGAGTTCAACCGTTTATGCCATAGCACTGCTAGCTTCAGGACAAAGCTCTGCTATCACTGGCACATATGCAGGGCAATATATTATGCAGGGATTCTTGGACCTCAAGATGAAAAAATGGATCAGGAACTTGGTGACTAGGTCTATTGCCATAACACCCAGTCTCATTGTCTCTATTATCGGTGGATCATCTGGGGCAGGACGCCTTATTATCATTGCCTCGATGATTCTTTCATTCGAGCTTCCATTCGCTTTGATTCCACTGCTCAAGTTTAGCAGCAGCAGCACCAAGATGGGACCCCACAAGAACTCCATGGCTATCATAGTGATATCGTGGATCCTAGGACTGGGAATCATCGGAATCAACGTGTATTACCTGAGCACAGGCTTCGTGGGGTGGCTAATCCATAGTAGTCTACCAAAGGTGGCCAATGTGTTCATTGGGATCATAGTGTTCCCTCTAATGGCACTCTACATTTTATCAGTCATATACCTAACCTTCAGAAAAGACACTGTGAAGACGTACATTGAAACGAAGGACGATCCAATGGTACAGACCCACATGGAAAAGGGAATTGTCAATCCACATGGGGTATTAGAGATGGGTCATGGTCCTATCAGAGAGGATTTGGCCGATATCCCATTGCCCCCATAG 1587 0.4694 MSCYVVIVSASIYLISYVTVIGAMKQKPGWRKFLAFVGPGFLVSLAYLDPGNLETDLQAGADHKFELLWVILIGLVFALIIQSLAANLGVSTGKHLSELCKAEYPLIVKYFLWLLAELAVIAADIPEVIGTAFALNILFNIPVWGGVLLTGFSTLLLLGLQRFGVRKLELLISALVFVLAGCFFGEMSYVKPPASGVLKGMLVPKLSGHSATGDAIALLGALVMPHNLFLHSALVLSRRIPNSVRGINEACRFFLIESGFALFVAFLINVAVISVSGTVCSATNISDENADRCSDITLNSASFLLQNVLGRSSSTVYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKKWIRNLVTRSIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMAIIVISWILGLGIIGINVYYLSTGFVGWLIHSSLPKVANVFIGIIVFPLMALYILSVIYLTFRKDTVKTYIETKDDPMVQTHMEKGIVNPHGVLEMGHGPIREDLADIPLPP 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1704 528 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 26 483 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 NCBIfam Nramp family divalent metal transporter 38 404 - -
Bisa09g1704 528 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 31 407 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 PRINTS Natural resistance-associated macrophage protein signature 165 186 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 PRINTS Natural resistance-associated macrophage protein signature 385 404 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 PRINTS Natural resistance-associated macrophage protein signature 112 138 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 PRINTS Natural resistance-associated macrophage protein signature 140 159 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 PRINTS Natural resistance-associated macrophage protein signature 215 238 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 PRINTS Natural resistance-associated macrophage protein signature 325 344 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 PRINTS Natural resistance-associated macrophage protein signature 353 370 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 Hamap Divalent metal cation transporter MntH [mntH]. 19 441 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1704 528 Pfam Natural resistance-associated macrophage protein 54 415 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1704 Bisa-ChrBisa09 25679103 25684883 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1704 24 505 Inorganic Solute Cotransporters AT1G80830 63.768 0.0 625