Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1703 ATGAGAGAATCTGGACGAGAAGGGAACGGCTGGTGGTGGCTGGATACATGGAAAGACCTGAGGAAGAGGGTTACAGTTTCTGATTATCAGGGATTGTTAGTTGGGATAGACAATGAAGATTTAATTAGAATTGTCCATTTCCTTGATAACTGGGGAATTATTAATTACTGTGCTCAGGTGCCAAGTCATGAGCAATGGAACAATGAGCCCTATCTGAAGGAAAAGACAAGTGGTGAAATTTGTGTGCCTTCAGATGCCTTAAAGTTTGTGGATGGTATAATCAAATTTGACAAGTCCAAGTGTAAGGCTGAAGATGATACTCTTCTCTGTACTGATTGCTTCCATAATGGGAGATTTATTATTGGTCATTCAAGTATAGATTTTATAAGTGTGGACTCAACTAGGGATCATGGTGATCTTGATGGGGATAGTTGGACTGATCAAGAAACTTCGCTGCTGTTGGAGGCAATGGAGGTTTACAATGAGAATTGGAATGATATTGCTGAACATGTTAGTACAAAGTCCAAAGCACAATGCATTCTTCATTTTCTTCGCCTACTCATGGAAGATGTGAAATTGTAA 582 0.3952 MRESGREGNGWWWLDTWKDLRKRVTVSDYQGLLVGIDNEDLIRIVHFLDNWGIINYCAQVPSHEQWNNEPYLKEKTSGEICVPSDALKFVDGIIKFDKSKCKAEDDTLLCTDCFHNGRFIIGHSSIDFISVDSTRDHGDLDGDSWTDQETSLLLEAMEVYNENWNDIAEHVSTKSKAQCILHFLRLLMEDVKL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1703 193 ProSiteProfiles Myb-like domain profile. 137 187 IPR001005 -
Bisa09g1703 193 SMART sant 141 189 IPR001005 -
Bisa09g1703 193 PANTHER SWI/SNF COMPLEX-RELATED 125 186 - -
Bisa09g1703 193 FunFam SWI/SNF complex subunit SMARCC2 isoform C 141 191 - -
Bisa09g1703 193 CDD SANT 144 187 IPR001005 -
Bisa09g1703 193 SUPERFAMILY Homeodomain-like 142 192 IPR009057 -
Bisa09g1703 193 Pfam Myb-like DNA-binding domain 144 187 IPR001005 -
Bisa09g1703 193 Gene3D - 141 191 - -
Bisa09g1703 193 ProSiteProfiles SANT domain profile. 140 191 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1703 Bisa-ChrBisa09 25674335 25677495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1703 88 189 EF-hand Containing Proteins AT3G07740 32.110 3.82e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa09g1703 Myb_DNA-binding 4.5e-11 CL0123