Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1700 ATGGGAAGCCTCCAACAGGATCAGCATCAGCATCATCATCATGTTGGAGGCAGTAACTGCATAGTAGCCGTGGCCGTGTCTTCTCCTTCCACCAACCTCGCTACTCCATCGTCTCTTCACAATGCTGATGATTCAAATCAACAGAAACCTGGGTGGAGGAAGTTCCTTGCATTCATAGGTCCAGGTTTTCTGGTCTCCTTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTGACCACAAATTCGAGCTGCTGTGGGTGATTCTCATTGGGCTGGTCTTCGCCCTCATTATTCAGTCACTGGCAGCAAATCTTGGCGTAAGCACCGGTAAACACCTTTCAGAATTATGTAAAGCAGAGTACCCATTGATTGTGAAGTACTTCTTATGGTTGTTAGCCGAGCTTGCTGTCATTGCTGCAGACATACCCGAAGTAATTGGGACAGCCTTTGCACTCAACATACTATTCAACATCCCAGTATGGGGAGGAGTTCTATTGACTGGCTTCAGCACCCTCTTGCTTCTGGGTCTGCAGAGATTTGGGGTGAGGAAGCTAGAGCTGCTGATATCGATGCTGCTATTCATGATGGCAGGATGTTTCTTTGGGGAAATGAGCTACATGAAGCCACCAGCATCAGGAGTGTTGAAGGGGATGTTGGTTCCCAAACTCAGTGGTCACTCTGCCACTGGGGACGCCATTGCCCTTCTTGGCGCTCTTGTCATGCCCCACAACCTGTTCCTCCACTCTGCTCTCGTGCTCTCCAGAAGAATCCCCAACTCTGTGCGTGGCATCAATGAAGCTTGCAGATTCTTCCTGATCGAGAGCGGATTCTCACTCTTCGTCGCATTTCTCATCAACGTCGCTGTCATTTCCGTCTCCGGCACCGTTTGTTCAGCCAGCAACATTTCCGATGAAAATGCAGATCGATGCAGCGATATCACCCTTAACTCCGCTTCTTTCCTTCTCCAGAATGTTCTGGGACGTTCGAGTTCAACCGTTTATGCCATAGCACTTCTAGCTTCAGGACAAAGCTCTGCCATCACTGGCACATATGGATTCTTGGACCTCAAGATGAAAAAATGGATCAGGAACTTGGTGACTAGGTCTATTGCCATAACACCCAGTCTCATTGTCTCTATTATCGGTGGATCATCTGGCGCAGGACGCCTTATCATCATTGCCTCGATGATTCTTTCATTCGAGCTTCCATTCGCTTTGATTCCACTGCTCAAGTTTAGCAGCAGCAGCACCAAGATGGGACCCCACAAGAACTCCATGGCTATCATAGTGATATCGTGGATCCTCGGACTGGGAATCATCGGAATCAACGTGTATTACCTGAGCACAGGCTTCGTGGGGTGGCTAATCCATAGCAGTCTACCAAAGGTGGCCAATGTGTTCATTGGGATCATATTGTTTCCTCTAATGGGACTCTACATTTTATCAGTCATATACCTAACCTTCAGAAAAGACACTGTGAAGACGTACATCGAGACCAAGGACAATCCAATGGTACAGACCCACATGGAAAAGGGAATCGTCAATCCAAATGGGCTCTTAGAGATGTGTCATGGTCCTATCAGAGAGGATTTGGCCGATATCCCATTGCCCCCATAG 1632 0.4816 MGSLQQDQHQHHHHVGGSNCIVAVAVSSPSTNLATPSSLHNADDSNQQKPGWRKFLAFIGPGFLVSLAYLDPGNLETDLQAGADHKFELLWVILIGLVFALIIQSLAANLGVSTGKHLSELCKAEYPLIVKYFLWLLAELAVIAADIPEVIGTAFALNILFNIPVWGGVLLTGFSTLLLLGLQRFGVRKLELLISMLLFMMAGCFFGEMSYMKPPASGVLKGMLVPKLSGHSATGDAIALLGALVMPHNLFLHSALVLSRRIPNSVRGINEACRFFLIESGFSLFVAFLINVAVISVSGTVCSASNISDENADRCSDITLNSASFLLQNVLGRSSSTVYAIALLASGQSSAITGTYGFLDLKMKKWIRNLVTRSIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMAIIVISWILGLGIIGINVYYLSTGFVGWLIHSSLPKVANVFIGIILFPLMGLYILSVIYLTFRKDTVKTYIETKDNPMVQTHMEKGIVNPNGLLEMCHGPIREDLADIPLPP 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1700 543 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 43 498 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1700 543 Hamap Divalent metal cation transporter MntH [mntH]. 41 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1700 543 PRINTS Natural resistance-associated macrophage protein signature 134 160 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1700 543 PRINTS Natural resistance-associated macrophage protein signature 187 208 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1700 543 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1700 543 PRINTS Natural resistance-associated macrophage protein signature 237 260 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1700 543 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1700 543 PRINTS Natural resistance-associated macrophage protein signature 162 181 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1700 543 Pfam Natural resistance-associated macrophage protein 76 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bisa09g1700 543 NCBIfam Nramp family divalent metal transporter 60 419 - -
Bisa09g1700 543 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 53 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1700 Bisa-ChrBisa09 25599374 25622688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1700 37 520 Inorganic Solute Cotransporters AT1G80830 61.492 0.0 603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1700 09 25599374 25622688 Bisa09g1700 09 25599374 25622688 ECH