Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1699 ATGGTGCAGTCGGAGACGAAGGTGGCCGTGAAGTGGTGGTGGTGGGTGGTAGCACTGCTTTTGACGGTGGCTTTTGGCGGCACTCACGGAGGCAAAGTCACCTACGACGGAAAGTCTTTGATCGTCGACGGTCAACATAAAATCCTCTTCTCTGCTTCAATTCACTATCCTCGCAGCACTCCTCAGATGTGGTCTTCTTTGATCGCGAAAGCCAAGGAGGGAGGAATAGATGTGATACAAACGTACGCATTTTGGAACCTTCACGAGCCCCAGCGAGGCCAGTTCGACTTCAGTGGAAGGCGTGATATAGTGAAGTTCATTAAGGAAGTCCAAGCACAAGGCTTATATGTGACCCTCAGAATTGGACCATTCATTGAGAGTGAGTGGGCTTATGGAGGTTTACCCGTTTGGTTACATGACGTTCCTGGCATTGTTTTTAGATCCGACAATGAACCATTCAAGCGTCACATGGCAGCCTTCACTGCCAGAATAGTAAACATGATGAAATCAGCCAATCTTTATGCTTCTCAAGGAGGTCCCATCATTCTATCACAGATCGAGAATGAGTATAGTATGGTGGAAGGGGCTTATCACGAGAAAGGACCACCTTATGTTCGATGGGCAGCTCAAATGGCGGTGGGGCTTCAAACTGGTGTGCCCTGGGTTATGTGCAAGCAAGATGATGCTCCTGATCCTGTGATCAACTCGTGCAATGGTATGGAATGTGGGAGAACATTCAAGGGACCTAACTCACCGAATAAGCCTTCAATCTGGACAGAGAACTGGACCAGTCAGTATCAAGCCTTTGGTGAAGAACCATACTTGAGATCAGCTGAAAACATTGCGTATAATGTTGCCTTGTTCATTGCAAAGAACGGAAGCTATGTTAACTACTATATGTACCATGGAGGAACCAATTTCGATAGAACAGCTTCTGCGTTTGTCACAACGGCTTATTATGATGAAGCTCCACTTGATGAATACGGCTTAATTAGGCAGCCAAAATGGGGTCATCTTAAGAATCTACATGCTGCAATCAAGTCATGTTCGAAACCTTTGCTTTCTGCAACACAAACTACACTCAACTTGGGCACACAACAAGAAGCCTATGTTTTCAGAAGGAGTTCGACAGAATGTGCTGCCTTTCTGGAAAACAGAGATAATAAAAAAGTCACAGTCCAATTTCAAAACTTACCTTATAAACTGGCCCCAAAATCAATTAGTATTTTACCAGATTGCAGGAATGTAGCCTTCAACACCGCCAAGGTAAGCGTAAAATACAGTACCAGAACAATGAAATCTGCAGTACAGTTTAAATCAGCTAACCAATGGGAAGTGTACAAAGAAGCCATCCCTAACTTTGGTGATACTTCATTGAGAGCAAACAAGCTATTAGATCAGATTGGCACGGCAAAAGATACATCAGACTATATGTGGTACACTTTCAGGTTTCAAGACGGTACTTCAAATACTCAATCTGCCCTTAGTGTATTTAGCCAAGGACATGTCTTGCATGCTTTTATCAACGGAGTTTTAAGCAATATCAAATTGAGAAATGGCGGCAACGACATTTCCTTTCTTAGTGCAACAGTTGGATTGCCGGATTCGGGAGCACACCAAGAGCGCAAAGTTGCTGGTTTATGGAGAGTCCAAGTTGGTGACAGAGATTTCAGTAATTACCCATGGGGATATCAGGTTGGATTGTCAGGAGAAAAATGGCAAATCTACACAGATTCTGGATCTAGTAAAGTTCAGTGGGAAAGCTTTAAAAGCTCTACTAGTCCACTCACATGGTATAAGACCACATTTAATGAACCAGCAGGAGAAGACCCTATAGCACTTAACCTTGGTTCTATGGGAAAGGGTCTGGCTTGGGTTAATGGCCAAGGCATTGGTAGATATTGGGTATCTTTTCACACACCAAAAGGGAATCCTTCCCAGAAATGGTATCATATCCCTAGGTCCTTCCTGAAACCTACTGGGAACCTACTAGTTCTATTTGAAGAAGAATCTGGGAACCCACTGGAGATTTCTCTGGACACAGTCACAGTCTCATGA 2058 0.4397 MVQSETKVAVKWWWWVVALLLTVAFGGTHGGKVTYDGKSLIVDGQHKILFSASIHYPRSTPQMWSSLIAKAKEGGIDVIQTYAFWNLHEPQRGQFDFSGRRDIVKFIKEVQAQGLYVTLRIGPFIESEWAYGGLPVWLHDVPGIVFRSDNEPFKRHMAAFTARIVNMMKSANLYASQGGPIILSQIENEYSMVEGAYHEKGPPYVRWAAQMAVGLQTGVPWVMCKQDDAPDPVINSCNGMECGRTFKGPNSPNKPSIWTENWTSQYQAFGEEPYLRSAENIAYNVALFIAKNGSYVNYYMYHGGTNFDRTASAFVTTAYYDEAPLDEYGLIRQPKWGHLKNLHAAIKSCSKPLLSATQTTLNLGTQQEAYVFRRSSTECAAFLENRDNKKVTVQFQNLPYKLAPKSISILPDCRNVAFNTAKVSVKYSTRTMKSAVQFKSANQWEVYKEAIPNFGDTSLRANKLLDQIGTAKDTSDYMWYTFRFQDGTSNTQSALSVFSQGHVLHAFINGVLSNIKLRNGGNDISFLSATVGLPDSGAHQERKVAGLWRVQVGDRDFSNYPWGYQVGLSGEKWQIYTDSGSSKVQWESFKSSTSPLTWYKTTFNEPAGEDPIALNLGSMGKGLAWVNGQGIGRYWVSFHTPKGNPSQKWYHIPRSFLKPTGNLLVLFEEESGNPLEISLDTVTVS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1699 685 SUPERFAMILY Galactose-binding domain-like 407 549 IPR008979 -
Bisa09g1699 685 Pfam Glycosyl hydrolases family 35 39 345 IPR031330 -
Bisa09g1699 685 Gene3D - 561 684 - -
Bisa09g1699 685 PANTHER BETA-GALACTOSIDASE RELATED 21 684 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 FunFam Beta-galactosidase 29 350 - -
Bisa09g1699 685 Pfam Beta-sandwich domain in beta galactosidase 353 423 IPR041392 -
Bisa09g1699 685 PRINTS Glycosyl hydrolase family 35 signature 294 309 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 PRINTS Glycosyl hydrolase family 35 signature 64 82 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 PRINTS Glycosyl hydrolase family 35 signature 257 272 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 PRINTS Glycosyl hydrolase family 35 signature 119 138 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 PRINTS Glycosyl hydrolase family 35 signature 621 637 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 PRINTS Glycosyl hydrolase family 35 signature 176 191 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 PRINTS Glycosyl hydrolase family 35 signature 594 608 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 PRINTS Glycosyl hydrolase family 35 signature 313 329 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 PRINTS Glycosyl hydrolase family 35 signature 43 60 IPR001944 GO:0004553|GO:0005975
Bisa09g1699 685 FunFam Beta-galactosidase 299 425 - -
Bisa09g1699 685 Gene3D Glycosidases 28 350 - -
Bisa09g1699 685 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 178 190 IPR019801 GO:0004553|GO:0005975
Bisa09g1699 685 FunFam Beta-galactosidase 564 685 - -
Bisa09g1699 685 SUPERFAMILY Galactose-binding domain-like 562 683 IPR008979 -
Bisa09g1699 685 SUPERFAMILY (Trans)glycosidases 30 349 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1699 Bisa-ChrBisa09 25586849 25597701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1699 16 684 Glycoside Hydrolase AT5G63800 59.596 0.0 873