Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1697 ATGTGTTTTTTCGTGGGGACTGGCTTGCAAAGCGCGATAATGATGCAATATGGGGGTTTTTCACTTCATTTATGCCTCCATTCATCCCCTCCAATACGACAATCCTTTTGTTCTGTTCGTCTCAATCCACCCGTTGTAGCACAACACCTCTTCTTCCCTCCATCCATGGAACCAGAAGAGGGCAAGCAATCATCCCACAAAACGCCATACACTGAACTCGAGCAAGTTAACTCTGATCTCATTCTAGCAATCACTTTGCAGGAGCAAGAAAGAGGCTTCACAATGCTGGGAACGATCGATAGCGAAAGCGACCTGGAAGACGTAAGTGAGTCCTCCTTTGAGGATGACGACGATGATTTTGATGAAGATGCTGCCTTTTTCGAGAACCAGCAGTTCGAATTAGCAGACCTTGGGTTTCGTGAGAGTGAAGGAAGCAATGATGAAGAAATGGAAGAAGATGAGATTGACCCAGATGAATTGTCTTACGAAGAAATGATAGAGTTGGGAGAGTTTATAGGAGAAGAACGAAGAGGATTATCAGCCACTGAAATTCCCTCGTGCTTGCATCCTCACACATGCAATTTTGCAGACAACAAAAGTGGAATAGATCGATGTGTGATATGTCAGGTTGAATATGAAGAAGGTGAAGCACTGGTGGCACTTCCATGTGAACACCCTTATCATCCAGATTGCATTACCAAGTGGCTTCAGATGAAGAAGGTTTGTCCTATTTGTACCACTGAAGTTTCAACTCCAAAGCTCCCCAACAAACCTTGA 777 0.4427 MCFFVGTGLQSAIMMQYGGFSLHLCLHSSPPIRQSFCSVRLNPPVVAQHLFFPPSMEPEEGKQSSHKTPYTELEQVNSDLILAITLQEQERGFTMLGTIDSESDLEDVSESSFEDDDDDFDEDAAFFENQQFELADLGFRESEGSNDEEMEEDEIDPDELSYEEMIELGEFIGEERRGLSATEIPSCLHPHTCNFADNKSGIDRCVICQVEYEEGEALVALPCEHPYHPDCITKWLQMKKVCPICTTEVSTPKLPNKP 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1697 258 ProSiteProfiles Zinc finger RING-type profile. 205 246 IPR001841 -
Bisa09g1697 258 Pfam Ring finger domain 204 245 IPR001841 -
Bisa09g1697 258 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 58 150 IPR043312 -
Bisa09g1697 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 256 IPR013083 -
Bisa09g1697 258 FunFam E3 ubiquitin ligase BIG BROTHER-related 171 252 - -
Bisa09g1697 258 SUPERFAMILY RING/U-box 204 252 - -
Bisa09g1697 258 SMART ring_2 205 245 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1697 Bisa-ChrBisa09 25574678 25576133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1697 152 249 C3H Transcription Factor Family AT3G63530 48.515 1.18e-28 107