LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa09g1670	ATGGACAGTCCCGTAATGGAGTTTAGTCCCAGCAATGCCGGTACACCGAAGCGCCGGAATGTTCGCCGGAAGTTGGTCCAATCAACGCTGTTCCCTCTCAAAACACAAGAATCCGAAGACAGAGCTGATGAGAAGGATGAGAAAAATTGCCTTGAGGATCGACAAGAGGAAGAAGAAGCACATTGGTGTGCGAGTGAGAACAAGAAGAGGAAGTCCAAAGGAAAAGTCACCCCTCGAACCAAAAATTCCAAGCAAAAGGGCAAGCAGCTGCAGAATAGCACACCAAAGAAAAGATTATCACCTCATGGGGTTAAGGGGGCAAGTTCGCAGCAAGTGTTGCACGATTTAGCACAGACTGATAAGCTGGTCCCTGATTTGCGGTTAGAGGCAAAACTGTCTGCCGAGGAGAATTCAAGGATATTTGCAGGCCGGCAAATACATCCATTTTTTTCATCATGGAAGGCAGAGAAGAAAATTCAGGAGGCAGGTGAATCAGAACTCAGTTTGTGCTCAGTAAAGGGGAAGGATGAAGAAGTAATAACATGTGCTCCTATCCATGTATTTGAAAATATTCTGGATGATCCATCATCCCTGGACTGGAAAAACTGGACCTTTTTGGGGCAGACTGCCAAAGAAAATTTTGATCCAGAGGGTTCAAATTCGTCTGTCTTTAAGAATTCTGTTGAACCCTTAAATTTTGATAAGCTTCACAGAACTTATTCTTCGTCTGGTGCTTCTATTCTTCGGAATGTCTTGTCTTGGTCAGATCAGCCTCCTATACAGCCACAAAATCTGCAAGAAATATTACCAGAAAATTCCGTTTTGCTGGGCAGCAGGCAAATGTGTTTTCAAATGCCAGAAGCCAAGGTGGAATTGGATGTAGATACTGAGCAAGCTGGCATTTTCAGAAAGTCAGAGTCAGAGCCACAGAGTAGATTTCTTCAAGAAAGTATGAGGTCATATTACCATAATTGTGAAGAAAAGCCTGAGTGCTGCTTATGGACATACAAGTACAAGCCAACAAAGGCCTTTGAGGTATGCGGTAATGATGAGTCTGTGAAATTTTTGTGTGAGTGGTTACGTCTTTGGCATGGAAGGCGTTATCAAGGCAAAAATGATTCCTCAGACAGGCATAAAGGTGACATTCAAGGTGATGATGATGATTATGACTGCTCTCATTCTGACTATGAGTCAGAAGATACAACTGAGGAGGGCTTCCTGGAGAATGTTCTTTTAATTACTGGACCAATTGGGAGTGGCAAGTCTGCAGCTGTATATGCTTGTGCCCAGGAGGAGGGGTTTGAGATTTTAGAGCTCAATGCATCAGACTGTCGTAATGGGACTGCTGTCAAGCAGCATTTTGGAGATACTCTTGGATCTCGTGGGGTCAAAAGGTTGTTGGAACACACTGTGAGCTCGCAAAAGAAGAAAACTAGGAAGTTGTCCTCAGGCCTGGCTTTGCCTAATAACAAAGCAGCTGATGAGTTAAACGAAGGAGTAATTGAACTGATATCTCTATCCGATGATGAAGCTGACAGCCCTGTTGCAACATCTCAGAGGTTGCTTGGCCAAGAAAATATAATTGGATGCGATGATGTCCGAACATTAATTCTAGTCGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACAAATTGCTGAGACAGCAAAGGGGCCAATTATATTAACCAGCAATAGTAATAATCCTGGCCTGCCAGATAATTTTAATAGACTACATGTTTCTTTCTTGTTGCCATCACCAAAGGAGTTGCTTTGCCATTTATACTCGGTTTGTGTCGCAGAAGGAGTTGACATTCATCCTCTTGTACTGGAGAAATTTATGAAGTCTTGTGGTGGAGATATCCGCAAAACAATTATGCATCTACAGTTTTGGTTCCAGAGTAGAACATTGAGAAAAGACAGAAATGCGCAGACATTATATGGCTCATTTCCATTTGATCTTGAGCTTGGCTATCAGATACTGCCCAAGATGATACCATGGGATTTTCCCTCCCAGTTATCTGAACTAATTGAGAAGGAAGTTACCAAGCTAGGAATCACAATGGAAGAAAAGTCTAGCTTGAAAGGGTTAGTTGAAGAACAGCTTGACACAAATGAAATGCAAAATGATTCAGATGTGCAGCAGATGGGGAATGATTATATGGAGGCCAAGAAGGTGGAAATGCTTGAGAGGAATGGATCTGTTACTGACTACAGTGAATTGGAAGCTCAATTTCATGCTCTTTCTGAGTTTTCAAATTCTCAGGGCACTCCAGTTGCACCCTCCAAGCAAAAGTTTCAAAGGAAACTTGTAGTGATGTCTTCTGATTCTGAGGATGAGTATTTAACTAATGGACATCCTTCAGACATATGTGATGATGCTAACAAGGGACAATCTCTTGAAGACAATACTGATTCTCCCTCTAAATTTCCATTGAATCAACAATACGCCAGTCTGTCATTTCTTGAGCTGGGTCCTGGATTGGAGGATTCAGAGGCAGACCAGTGTAAATATTTAAAAACAGCTGATGATATGTGCTTGAATGAAACATCCAAGTCGGTTGATGTATCCTTTGTTCCAGAATCAACAATTGTTCCTGAGACCGTAATAAATGGAATAGACACAATCTCTGGAGCAGTGTCTTGTGGTCATCTTGCTGATCCTTTAGAAGTTTCTGTGAATAATGAATTACTACCATTCACTTTCGGTGTTTGTAAAAGCTTAGCCAGGTTGCCACGGAATGATGATTCATTGGCAAGTACTGAAATTCCAGAGTCTTCTCAAAAAGAGGTTGTGCAAGATTTAATAGATGAAAATATGGAAACTACACCTGCATTTAATGTGATGGATGAATGCAGTCGTGTGGATTTCAAATTGAAGTCCAATTTTGTTGAGCCCTCTCCAGCAATGGAGACAGATGCTGTGCATAGATTATGGAGAGAACTTCGTGAAAGTCGAACAGACTTAAGACAGCATGATGCCATTGAACAGTCAGGTGCTTTTCAAGTTGTTAAACTAGCTTGTAGTATGAGCGATCTAATTTCAGAAGCTGATTTATTATTTGGTAATTACCAACAAAAACAATGTGATATTTTGGAACCTCCAGTGTCACTTTTTAATGAAGACACATTTGATCGGTTTGATGAGCAAATGATGGGGTCCACTGTTGCTGAGCATGGGTTTTGTTTTTACGCCAAACACCTGTCAGATATGGGATTGACATTGGGCTATGAGAGCAGTGTAGATTTAACTTTGGAGATGTTGGCTTCCACAACTAACACGAGGGCACTGGGGAATTTAGCTAGACAGGGCCTCACGAAACACATTAACTTCTGTACTGGAAAGGCATTAGAAGTGAACGAGCCAAGAGATGATTTGCCGAAGAGTAAAATGCAGACATCTCTGTTCAATGTGATCCAGTCCATTGTTCCCGCAAGATTATCTTTGGCACTGAAAGGCGTTGCATTCAATGAATATCTATCTTCGCTGCGCCATATTTCAAAGTCAGAAGCTTCCCGCATATCACAAAGTGTTGAAACGACAAGAAGGCGAAGGGCGGCACGGGGTGCTCAACATTACCTAAGCAAGGGTGCAATGATGTTGTCGCCTGAAGATATATCATTGTTGTGTGGAGGAGAATTGTACAGAAAGATTTCTTCACAATAA	3687	0.4188	MDSPVMEFSPSNAGTPKRRNVRRKLVQSTLFPLKTQESEDRADEKDEKNCLEDRQEEEEAHWCASENKKRKSKGKVTPRTKNSKQKGKQLQNSTPKKRLSPHGVKGASSQQVLHDLAQTDKLVPDLRLEAKLSAEENSRIFAGRQIHPFFSSWKAEKKIQEAGESELSLCSVKGKDEEVITCAPIHVFENILDDPSSLDWKNWTFLGQTAKENFDPEGSNSSVFKNSVEPLNFDKLHRTYSSSGASILRNVLSWSDQPPIQPQNLQEILPENSVLLGSRQMCFQMPEAKVELDVDTEQAGIFRKSESEPQSRFLQESMRSYYHNCEEKPECCLWTYKYKPTKAFEVCGNDESVKFLCEWLRLWHGRRYQGKNDSSDRHKGDIQGDDDDYDCSHSDYESEDTTEEGFLENVLLITGPIGSGKSAAVYACAQEEGFEILELNASDCRNGTAVKQHFGDTLGSRGVKRLLEHTVSSQKKKTRKLSSGLALPNNKAADELNEGVIELISLSDDEADSPVATSQRLLGQENIIGCDDVRTLILVEDVDILFPEDRGCIAAIQQIAETAKGPIILTSNSNNPGLPDNFNRLHVSFLLPSPKELLCHLYSVCVAEGVDIHPLVLEKFMKSCGGDIRKTIMHLQFWFQSRTLRKDRNAQTLYGSFPFDLELGYQILPKMIPWDFPSQLSELIEKEVTKLGITMEEKSSLKGLVEEQLDTNEMQNDSDVQQMGNDYMEAKKVEMLERNGSVTDYSELEAQFHALSEFSNSQGTPVAPSKQKFQRKLVVMSSDSEDEYLTNGHPSDICDDANKGQSLEDNTDSPSKFPLNQQYASLSFLELGPGLEDSEADQCKYLKTADDMCLNETSKSVDVSFVPESTIVPETVINGIDTISGAVSCGHLADPLEVSVNNELLPFTFGVCKSLARLPRNDDSLASTEIPESSQKEVVQDLIDENMETTPAFNVMDECSRVDFKLKSNFVEPSPAMETDAVHRLWRELRESRTDLRQHDAIEQSGAFQVVKLACSMSDLISEADLLFGNYQQKQCDILEPPVSLFNEDTFDRFDEQMMGSTVAEHGFCFYAKHLSDMGLTLGYESSVDLTLEMLASTTNTRALGNLARQGLTKHINFCTGKALEVNEPRDDLPKSKMQTSLFNVIQSIVPARLSLALKGVAFNEYLSSLRHISKSEASRISQSVETTRRRRAARGAQHYLSKGAMMLSPEDISLLCGGELYRKISSQ	1228

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa09g1670	1228	MobiDBLite	consensus disorder prediction	786	815	-	-
	Bisa09g1670	1228	MobiDBLite	consensus disorder prediction	369	401	-	-
	Bisa09g1670	1228	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	333	640	IPR027417	-
	Bisa09g1670	1228	MobiDBLite	consensus disorder prediction	36	71	-	-
	Bisa09g1670	1228	MobiDBLite	consensus disorder prediction	1	110	-	-
	Bisa09g1670	1228	MobiDBLite	consensus disorder prediction	83	110	-	-
	Bisa09g1670	1228	Gene3D	-	332	587	IPR027417	-
	Bisa09g1670	1228	FunFam	p-loop containing nucleoside triphosphate hydrolase superfamily protein	594	655	-	-
	Bisa09g1670	1228	Coils	Coil	34	61	-	-
	Bisa09g1670	1228	PANTHER	CELL CYCLE CHECKPOINT PROTEIN RAD17	9	1227	IPR004582	GO:0006281
	Bisa09g1670	1228	MobiDBLite	consensus disorder prediction	369	400	-	-
	Bisa09g1670	1228	MobiDBLite	consensus disorder prediction	1	16	-	-
	Bisa09g1670	1228	Gene3D	-	592	654	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa09g1670	334	646	Core DNA Replication Machinery Family	AT5G22010	22.671	4.04e-10	62.4

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa09g1670	09	24991794	25002627	Bisa09g1670	09	24991794	25002627	ECH