Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1653 ATGGCCAGACTGGCCTCCACGGACTCGTCGGAGATTGTCTGCCCTCATTGTTCGGGTCAATTCCTCGCTGAAACCAATATACCAATGCCCAGACATTTCCTGGATTTCACCGACAACGATCCTTCACCAGAAGCACGTTTGCTCGAAGCTCTTTCTCTGTTGCTTGACCCATTCAACGGCCGTTTCTCCGATGATGTACAAGGTCAACCTCCACGCTTTCGTTGGATTCAGGAGCGACCTCGCGAACAAGAAGGCAGACCTAATGCGGACGCCGATTCAGAAATTCCAGTCCGTCGACGACGACAGCGTCGTACTGATAACAGAGCTACTGATCCCGACGAGGAGGATCCAGGACATGGAATTCAACGGACTTGGATAATTCTTCCGCCGATTGATCCGTCTAACTCATTTGAACCGATTCCACCACGTAGACGGCGACTTATTCCGATACCGCGTCGGGTTGACTCGAGAGACTATTATTTGGGACCAGGTCTGGACGAACTGATTGACCAATTGACGGAAAATGACAGGCAAGGGCCACCTCCGGCGTCGGCGAGAGCTATCAATGCGATTCCGAGTGTGAAAATCTCAGAGAACCATCTGAAGGAGAATTCTTATTGTCCGGTTTGCCAGGAAGAATTTGAATTGGGTGGAGAAGCGAGGGAATTGCCGTGCAAGCATATATACCACTCAGATTGCATTGTTCCTTGGCTGAGGCTTCACAATTCTTGCCCTGTTTGCCGGGTTGAGGTGCCCGATGAATCCAGTGACGACGACGAAGGAGGAGGAGGAGGAGGGAGGTTGCGAAGGTGCTTGAGGTGGAGTCAACTTCGATTTGCTTCTTTGTGGCCTTTCCCTGGAAGGCATCGTCGGATTAATCCGGAAGGGCAGAATGTTACTGCTGCTTCAAGGGCAGCTAATCCAGGACGGTTCCCATGCTGTATTCTCTGA 951 0.5142 MARLASTDSSEIVCPHCSGQFLAETNIPMPRHFLDFTDNDPSPEARLLEALSLLLDPFNGRFSDDVQGQPPRFRWIQERPREQEGRPNADADSEIPVRRRRQRRTDNRATDPDEEDPGHGIQRTWIILPPIDPSNSFEPIPPRRRRLIPIPRRVDSRDYYLGPGLDELIDQLTENDRQGPPPASARAINAIPSVKISENHLKENSYCPVCQEEFELGGEARELPCKHIYHSDCIVPWLRLHNSCPVCRVEVPDESSDDDEGGGGGGRLRRCLRWSQLRFASLWPFPGRHRRINPEGQNVTAASRAANPGRFPCCIL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1653 316 ProSiteProfiles Zinc finger RING-type profile. 207 248 IPR001841 -
Bisa09g1653 316 MobiDBLite consensus disorder prediction 61 125 - -
Bisa09g1653 316 CDD RING-H2_RNF126-like 207 248 - -
Bisa09g1653 316 FunFam E3 ubiquitin-protein ligase RING1-like 171 254 - -
Bisa09g1653 316 MobiDBLite consensus disorder prediction 75 120 - -
Bisa09g1653 316 SUPERFAMILY RING/U-box 187 252 - -
Bisa09g1653 316 Pfam Ring finger domain 206 248 IPR001841 -
Bisa09g1653 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 254 IPR013083 -
Bisa09g1653 316 SMART ring_2 207 247 IPR001841 -
Bisa09g1653 316 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 89 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1653 Bisa-ChrBisa09 24633845 24634981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1653 151 261 C3H Transcription Factor Family AT5G01980 45.133 1.58e-27 110