Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1650 ATGGCCATGATAATGCCCATGGACATGGACACCGTCCTTGAGCTTGACTTCTCCGACTTCAGCAGCACCACTACCACCACGCCTACTTCCGACGACGACCATTCCGGTCTCTGCAACTGGAACCATTGGTCCCCCTTGATCAACTGGGACGCCTTCACCGGCGGCCAAGATGACTTCCACGATCTTATGGAGTCCATGATGGACGAAACTACTGTGGGGTCCGGCATGGAATTAGAAGAAATAGAAGGCTACAACTCTGGGAATTCCACGTTGACGGAGGCAGCGAGGGCGGAAGAAGAAGGAAGCGGGGGCGGAGTGGAGGATTTGAAGGGTCTCAGGCTGGTGCACCTTCTGATGGCGGCGGCGGAGGCCCTCACCGGCACCAACAAGAGCCCCGATCTGGCTCGAGTGATATTGATTCGGCTCAAGCAACTGGTTTCCCCCACCGAGGGCTCCAACATGGAGCGCTTGGCGGCGTATTTCACGGAAGCCTTGCAGGGTTTGTTAGAAGGCACAAGGACTGCACTCCCACCACCACCCCTCTGCTGTCCCCACAAGGAGGACCACAAACCCACCGATTTCCTAACCGCCTTCCAGCTCCTCCAGGACATGTCCCCCTACGTGAAGTTCGGCCACTTCACTGCCAATCAGGCCATCATGGAGGCCGTGGCCCACGAGAGGCGGGTCCACATCGTCGACTACGACATCATGGAAGGCACCCAGTGGGCCTCCTTAATCCAATCCCTCGCCTCCACAAACCACGGCCTCCCCGGCCCACACCTCAGGATCACCGCATTGTCCAGAATCGGAAGCGGAAGAAAATCCATCGTCTCCGTGCAAGAGACAGGGCGTCGATTGACGGCGTTCGCGGCCTCCGTGGGTCAGCCCTTCTCGTTTCACCAGTGCAGGTTGGAGCCGGACGAATCGTTTCGAGTCTCGGGTCTGAAGCTAGTTCGAGGAGAGGCCCTGGTGTTCAACTGCATGCTCCATTTGCCTCATTTAAGCCACAGAGGGCCGGATTCGGTGGCGTCGTTTTTAAGCGGAGCGAAGACATTGAAGCCGAGGCTGGTGACATTGGTGGAGGAGGAGAGGGGGCCGAGTCCGGTGGGGGAGACGGGGTTCGTGGGGCGGTTCATGGAGTCGCTGCATCATTATTCGGCGGTGTATGATTCGCTGGAGGCGGGGTTCCCGATGCAGAAGAGGGGGAGGGTGTTGGTGGAGAGGGCGTTCTTGGGCCCCCGAATAGCGGGGTGGGTGGGCCGGATCTACAGAAGCCCAGGGGAGGAGGAGGACAGGGGGTCGTGGGGGGAGTGGTTGGGTGAGGACGGGTGCAGGGGAGAGGGAATAAGCTTCGCCAATCACTGTCAAGCAAAACTGTTGGTGGGACTGTTCAACGATGGGTATAGGGTGGAGGAGTTGGGTGGGAATAAGTTGGTGTTGAGTTGGAAGTCTAAGCCTTTGCTTGCTGCTTCCATTTGGTCATTTTCTTCCTACACTACCTAG 1503 0.5822 MAMIMPMDMDTVLELDFSDFSSTTTTTPTSDDDHSGLCNWNHWSPLINWDAFTGGQDDFHDLMESMMDETTVGSGMELEEIEGYNSGNSTLTEAARAEEEGSGGGVEDLKGLRLVHLLMAAAEALTGTNKSPDLARVILIRLKQLVSPTEGSNMERLAAYFTEALQGLLEGTRTALPPPPLCCPHKEDHKPTDFLTAFQLLQDMSPYVKFGHFTANQAIMEAVAHERRVHIVDYDIMEGTQWASLIQSLASTNHGLPGPHLRITALSRIGSGRKSIVSVQETGRRLTAFAASVGQPFSFHQCRLEPDESFRVSGLKLVRGEALVFNCMLHLPHLSHRGPDSVASFLSGAKTLKPRLVTLVEEERGPSPVGETGFVGRFMESLHHYSAVYDSLEAGFPMQKRGRVLVERAFLGPRIAGWVGRIYRSPGEEEDRGSWGEWLGEDGCRGEGISFANHCQAKLLVGLFNDGYRVEELGGNKLVLSWKSKPLLAASIWSFSSYTT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1650 500 ProSiteProfiles GRAS family profile. 105 494 IPR005202 -
Bisa09g1650 500 Pfam GRAS domain family 114 493 IPR005202 -
Bisa09g1650 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 82 489 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1650 Bisa-ChrBisa09 24580340 24581842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1650 111 497 GRAS Transcription Factor Family AT5G17490 35.910 9.20e-50 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa09g1650 GRAS 8e-95 CL0063