Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1647 ATGGCCCTGTGGGATCTCAACGTCGTGAAAGAAGATTCTGGTTCCGGGGAGACATCGAACTTGTCCCTGGTGAATTTGGAAGAATCCCGAGACGAAGATTCCTCCTCCTTTGTCGTCTTCGACATACTGAAGAGGGAAACAGAGTGGAGATTGAAACTCATGTGCAGCCTGGATCTCTGTCTGTATGTTCATTATGGACAGAACAGACCAAAAGATGCAAAAACTCTAGCTCAGAGTGATGTTGTGATTACTACATATGGTGTCTTAACCTCTGAATTTTCCAGTGAGAATGCAGAGGATCATGGTTTACTTTTCTCAATTCGGTGGTTTAGCGTAGTACTTGATGAGGCACATACAATAAAATCTTCCAAAAGCCAAATTTCTATCGCAGCTACTGCTTTGGTTGCTAACAGACGTTGGTGTCTTACTGGAACTCCTATTCAGATTGAGCCTTCAATAGGGATATTATGGCAATCTAATATTGTTCTTGTGGAAGGAAGCTGGATCTCCTAG 513 0.4288 MALWDLNVVKEDSGSGETSNLSLVNLEESRDEDSSSFVVFDILKRETEWRLKLMCSLDLCLYVHYGQNRPKDAKTLAQSDVVITTYGVLTSEFSSENAEDHGLLFSIRWFSVVLDEAHTIKSSKSQISIAATALVANRRWCLTGTPIQIEPSIGILWQSNIVLVEGSWIS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1647 170 Gene3D - 43 152 IPR038718 -
Bisa09g1647 170 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 59 148 - -
Bisa09g1647 170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 148 IPR027417 -
Bisa09g1647 170 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 61 164 IPR014001 -
Bisa09g1647 170 Pfam SNF2-related domain 58 148 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1647 Bisa-ChrBisa09 24541223 24544302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1647 59 148 RAD5 or RAD16-like Gene Family AT5G22750 77.778 1.38e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bisa09g1647 SNF2_N 3.6e-23 CL0023