Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1625 ATGTACTACAAAGATGCAAGCATAGAGGAAGACCCTGGTCTCTCTCCAGTCTCAAATCCTCCTCCTTCTCCTTCGTCTCCAGTCCACAGTAAGGAAATGGCACAAACGCTAGCAACGCCTGTGGCGCCTTCTCTCTCTGTTATCTGCAATACCCACACTTCTAATTCCCTTTCTAGAAGCGTCTCTTTCGGTTTCTCCAACCCTAAGGTTCAGGGTCTAAGCATCCAATGTGTTCGTGTTGGAGGTGTAGAGATTCCCAACAACAAGCGCATTGAGTTCTCACTTCAATATATCCATGGAGTTGGGAGAAGCAAGGCTCGGAAAATCCTGTGTGACATCAACATGGAGAACAAAGTCACAAAGGATTTGTCTGAGGAGGAACTCATCACTCTTAGGGATGAAGTCTCCAAGTACATGATTGAAGGCGACTTGAGGCGGTTTAATGCGCTTAACATAAGGAGACTGAAGGAGATCCAATGCTATAGAGGGATCAGACATATTCAGAGGCTTCCTTGTAGAGGACAACGCACCAAGAACAATTGCCGGACCTTGAAGGGTAAGAAGGTCGCCATTGCTGGAAAGAAAAAGAAGTAA 594 0.4613 MYYKDASIEEDPGLSPVSNPPPSPSSPVHSKEMAQTLATPVAPSLSVICNTHTSNSLSRSVSFGFSNPKVQGLSIQCVRVGGVEIPNNKRIEFSLQYIHGVGRSKARKILCDINMENKVTKDLSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGIRHIQRLPCRGQRTKNNCRTLKGKKVAIAGKKKK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1625 197 SUPERFAMILY S13-like H2TH domain 78 189 IPR010979 GO:0003676
Bisa09g1625 197 ProSiteProfiles Ribosomal protein S13 family profile. 80 186 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bisa09g1625 197 FunFam 30S ribosomal protein S13 75 146 - -
Bisa09g1625 197 Gene3D - 78 146 - -
Bisa09g1625 197 MobiDBLite consensus disorder prediction 1 32 - -
Bisa09g1625 197 Pfam Ribosomal protein S13/S18 79 183 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bisa09g1625 197 Hamap 30S ribosomal protein S13 [rpsM]. 77 193 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bisa09g1625 197 Gene3D 30s ribosomal protein s13, domain 2 147 197 IPR027437 -
Bisa09g1625 197 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 71 195 - -
Bisa09g1625 197 NCBIfam 30S ribosomal protein S13 79 188 IPR019980 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1625 Bisa-ChrBisa09 24268648 24270366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1625 76 195 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 30.822 7.84e-07 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1625 09 24268648 24270366 Bisa09g1625 09 24268648 24270366 ECH