Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1618 ATGCATCATCTACCTCGGATTTTCGGTCATAGCAAGCCAACTAAGAGCATGGATCGGCAGACAATCCGAAGAAAACCAAAGCTCGAGCGCCGCAACGCCGCCAAGTACTTTGAGTATGATGCTGGATCGACTTCGTCGTCGCTGGATGACTCCACTGGATCTCTCTATACACGATCAATGGAGTTCTATGATCGAACCAGCTTTCGAATTGAAGGAGTTGAGGGTGAGTTTGATATAATATGCAGGAGCTTGGGCCTATCAGGACCAGAAGACTTCTCTATACCTGCTGCTGCGTGGGAGTCGATGAAGGTTAGATCGTCTTCGGATATTTTGCCAAGGTTGAAGCTGAGCGAGTTGGAAAGTCAGGAGAAAGAGGAGCTGAAAGAAGAAGACGTGAGTCAAATAGTGAGTGAATTGGGTAACAAATATGGAGAAAAGGTTTCGATTAGAGATGTAGCTGAGTCAGCTGAAGACGAGCCTGCTGAAACTAGTGGGTGCTGCACTGATGCTGCTGGTCCATGTGGAGTCGGTGTCGGAGGAGGTATCAAGGGTCTCCGTCCGCCGATGCTTAAGCCACCGCCAGGGATGAGGCGTCCAGTTATTGACAACACATGCTCCACTTGGGATATTTTGAGGGATTTTGCACCGCAAGATGACAGACAGTCATCGGAAAAGTATGGGGAATTGAACTATTCCAACGATGACCAAGAAATACGGCGAGAATCAGGGGAAGTACAAGAAGAAGAAGAAGCAGTAGGACGGGAAGTAGTTGGAGTTACTCCAAAGAGAGAAGAGGATGATAAAGGGACGGAGCTCGGGTCGATCGTTGCTCAGCTTTCGGGATCGAGTTCGTTCACAACGTCAAATGAAGATGATTCTTCTAGCACTACCACAGATCCTAGGTCGACTAGTATATCTCCTAACGGAAAACATAGACGAATTATTGCGAACTGGCAAAAGGGTGAGCTTTTGGGACGTGGTTCGTTTGGGTCCGTCTACGAAGGAATTTCTGAAGATGGATTCTTCTTTGCTGTAAAAGAAGTTTCATTGCTTGATCAAGGGAATCAGGGAAAGCAAAGTGTCTATCAACTTGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGACAATATTGTTCAATACTACGGCACAGAAATGGATGAATCAAAGCTGTATATCTTTATTGAGTTTGTTACTAAGGGTTCCCTTGCACGCCTCTACCGGAGTTACAACCTTCGAGATTCTCAAGTTTCTGCCTACACAAGGCAGATTCTGCATGGTTTGAAGTATCTTCATGATCGAAATGTGATTCACAGGGATATTAAATGTGCAAATATATTGGTAGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTAGCAAAGGCAACCAAATTAAATGATATAAAGTCATGCAAGGGTACAGCATTTTGGATGGCCCCTGAGGTTGTCAAAGGCAAGAATCACGGTTACGGGCTTCCAGCAGATATATGGAGTCTTGGGTGCACTGTGTTGGAGATGTTAACAGGCCAAATTCCTTACTGTCATCTGGAATGTATGCAGGCATTGTTTAGAATTGGAAAAGGTGAGCGCCCTCCAGTTCCTGATTCTCTTTCAAAAGATGCACGGGACTTTATACTACAATGTGTTCAAGTCAATCCAGATGATCGCCCCAGCGCTGCTCATCTCTTAGACCATCCATTTGTCCAAAAGCCAGTCATGTCGTCTGGCTCTGCATCCCCATATATCCTTGGCAGAAGGAGTTAG 1773 0.4546 MHHLPRIFGHSKPTKSMDRQTIRRKPKLERRNAAKYFEYDAGSTSSSLDDSTGSLYTRSMEFYDRTSFRIEGVEGEFDIICRSLGLSGPEDFSIPAAAWESMKVRSSSDILPRLKLSELESQEKEELKEEDVSQIVSELGNKYGEKVSIRDVAESAEDEPAETSGCCTDAAGPCGVGVGGGIKGLRPPMLKPPPGMRRPVIDNTCSTWDILRDFAPQDDRQSSEKYGELNYSNDDQEIRRESGEVQEEEEAVGREVVGVTPKREEDDKGTELGSIVAQLSGSSSFTTSNEDDSSSTTTDPRSTSISPNGKHRRIIANWQKGELLGRGSFGSVYEGISEDGFFFAVKEVSLLDQGNQGKQSVYQLEQEIALLSQFEHDNIVQYYGTEMDESKLYIFIEFVTKGSLARLYRSYNLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDASGSVKLADFGLAKATKLNDIKSCKGTAFWMAPEVVKGKNHGYGLPADIWSLGCTVLEMLTGQIPYCHLECMQALFRIGKGERPPVPDSLSKDARDFILQCVQVNPDDRPSAAHLLDHPFVQKPVMSSGSASPYILGRRS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1618 590 Gene3D Transferase(Phosphotransferase) domain 1 316 583 - -
Bisa09g1618 590 MobiDBLite consensus disorder prediction 275 310 - -
Bisa09g1618 590 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Bisa09g1618 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Bisa09g1618 590 SUPERFAMILY Protein kinase-like (PK-like) 294 576 IPR011009 -
Bisa09g1618 590 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 159 580 - -
Bisa09g1618 590 FunFam Mitogen-activated protein kinase 1, putative, expressed 316 583 - -
Bisa09g1618 590 MobiDBLite consensus disorder prediction 214 271 - -
Bisa09g1618 590 ProSiteProfiles Protein kinase domain profile. 318 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1618 590 MobiDBLite consensus disorder prediction 214 311 - -
Bisa09g1618 590 SMART serkin_6 318 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1618 590 Pfam Protein kinase domain 319 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1618 590 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1618 Bisa-ChrBisa09 24113256 24121446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1618 27 575 MAP Kinase Kinase Kinase AT4G08500 51.933 4.71e-177 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa09g1618 Pkinase 8.5e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1002 05 17175784 17181272 Bisa09g1618 09 24113256 24121446 CCT
Bisa09g1618 09 24113256 24121446 Bisa09g1618 09 24113256 24121446 ECH