Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1613 ATGACCGGGGACCGATGTCACCGCAGGAAGAAAATGATGGGTAGGGGTGCGGAAGGAGGCTGCGGCACCGAGGAGAGGCCTTGCCCAGTTTCGAGGGTTCCGGTTAAATTCCCGGCGACCCAACCAGGAAATTCTGATAACTCCACTGTACTTGAAATTGATTACTATTCGCAGGCTAGAAAAGCGCTCAGTGAGCGGTCGCCTTTTGATGTTGCCGAAGAGACGTCGACATCGACTGTGTCCACTCTGCCTACTGGGTTGGCAAGCTTCTTAAACCGCCATTCTGAAAGTCGGAGACGCCACAAGAAGCCTCATTTGGGCGCGGACAAGAAATCGTCTAGAGCATGCGAGAAGTTACGTAGTTCAAGCATTTGGCTCGAGACTGAGGAGTACTTCAGGGACTTAAAATTGCCTGACATAGACACCTTGTTGGAGGCATCGTCGTCTTTCAGTTTAGCTGCTCGGAAGTGTTTTTCTATTCCTCTAGTGGGAAATGCTCCGGGGTCAAATGTAGTTAGTAACGAGAATGACAAGGAGACTGATGAAAATCTAAATAGCGAGATAGTGAAAAATGAGGATGGTGCCATGGAAATTGACAGTGTTGCAGCTGAAGTTTTGCCTCAGGACGAGAAGGATTATGCTACTTCTGATTATTCTAGCAGTTTAGAATGGCTTTTAGGATGTAGGAATAAGATTTCTCTAACTTCTGAGCGCCCTTCAAAGAAAAGGAAGCTTTTGGGTGGTGATGCTGGGTTGGAGAAATTTTCAATTGCCAGTCCTTGTGACGGAGGCTCGTCTCTGTGTCATTATTGCCATAGGGGGGACACCAGTAGAGAGTCCAATCAATTAATTGTCTGCGTCATTTGTAAAGTTACAGTTCACAAGAAGTGTTATGGTGTGCAAGATGATGTAGACGAGTCTTGGTTGTGCTCCTGGTGCAAGCAAAAGGATGATATTAGTGAAATGGTGAATCCTTGTGTGCTTTGCCCAAAGAAGGGTGGTGCTTTAAAACCTGTTCATAGAAGTGCTGAAAGTGTTGGTTCTCTGCAATTCGCTCACTTGTTTTGTTGTTTGTGGATGCCTGAGGTTTATATAGAGGATTTGAACAAAATGGAGCCTGTTATGAATATTGGAGGAGTCAAGGAATCTCGGAGAAAATTAGTCTGTAATGTGTGCAAGGTGAAGTTTGGCACATGTGTTCGGTGTAGCCATGGTAGCTTTCAGTCTTGCTTATTGCTATTGTGGACTAGATGTCTTTTGCTAATGAATCTTGAGCCCAAATGCACCTCTTACCCCTCTAAGAGGAAGGGTGAAAATAGCCTTGTCAGGGCTTCTTTCCATCCTTTATGTGCAAGGGAAGCTAGACACAGGATGGAGATTTGGGCAAAAAATGGTTATGACAATGTTGAGTTGCGGGCATTTTGCTCCAAGCACTCAGATGTACAAGAGAGCAGCATCATCTTGCCATCGGGTGGCTCTGTATCTTTTGGTAGCGAGTTCTCTGTTGCTAATAGCCCTCCAGTGACATCGCCAGCAGGCGGAGAACACAATTTGAAAATTGGTTGCAGAAATGGAGACAATATTGGGATAGTTTCTGATGCTAGTCCTGATAAGTCGAGGCACAATAATCCCCAGGATGGAGAATTGTCTGATTGTAGGTTCAGTGCTTGTGACATGGTGGAATGTGGTGGTTCGCCACAACTAAATAATTCCGGGGTGATGGGTAGGGCTGATGATAATGTTAATGCGTCTGACTCCCTTGGTTTTGCTCTTGTTTTGAAGAAGGTATTTTACAATATGAGTAAATTAATGCGCAAGCATTATGTTGTGAATCCTAAATTTAAAATTGCTCCTTGGCAGTTGATAGATCGAGGAAAAGTTGATGTTAAAGAAGTAGCTTTGGAGATTGGCATTTCACCAGATACATTAAGTGCAAATATCAATGAGTCTTGCATGGCCCCCGATGTGCAACGTAAAATAGTCAATTGGCTAAAAGATCATGTATATACTAACACATTTCAGAAAAGTTTGAAAGTCAAATTGAAGCCTCCCAATTCATCCAAGGATGAAAAAGGAGTCACCGATGGTTCTGATGCTTTACCTATATCAGACTCAGATTTGCCAGATCCTGTTGCTGTTAAATCAGTACCTCCAAGGAGAAGAACCACCAGCAACATTAGGATTTTGAAGGATAACAAAGTCATATGTTCATCTGAGGTGGTCTCCAATGAGAATGGGATGTCAATGGACAAGGTCAAAGCAGGTCAATCCAATAATGAAAATTCAGGAACATTAAATGAAGCATCCATTCCTGATACATCTGAAATGCATCAGCTTGTTTGTAGTCCTTGCACGATGGGTGTGATTCTGAACAGGAAACACCTTCTTGTTAAATGCTTGGTCAGATTCTCTAGTTATCCAGGAACAGGAATCAAAATAGAAGTTTTATACGAGTCTGGTTTCCTCTTACTTTCTGTCTTCCCCTCTTTCATATACATCCTGAAATTAACCAAGTCTGAGGATACTGTTCCTGAAACTCAAGGGAATGCTGATAAACCTTACAAAAGCAGCTTATCTGGATGTGTTTCAGAAGAAAAGTTTGCTAATGCATCTATTCTTTCTGAGCAGCACCGTTCTTTTTGTTCTGCATCAGAGCCATCTTCTTCTGGTTTCATGGTCTGTGCAAATGAGAAAAATATAGGCCTCTATTGGGGAGTTGGAAGCAAGTGCAGCATGAATTGGCTGGTGGGAGGTTGCGAGAAGAATCCAGAAGGAGATCCGAAATCCAATTGGCTTTCTCTTTTAAAGGCCAGGTTTCATTTTATGTTATGCAGGAAGGTTGAAGCAAACTCCAGTTACATTCACCCAACAGCATTAACAGATTCTGCTTTTGGCAGTGACATTTGTAAGGCTGATAAAGTAAATATGGAGCAATTGATTATGGCTAGAAACATGGGTGTATTAGAATCTTGTCCAGAAGATGAAGTGGAGGGGGAACTTATATATTTTCAGCATAGATTATTGCAGAATACAGTTGCAAGAAAGAAATTTGCTAATAATTTAATCTATAGTATAGCTAAGAGTCTTCCATGGGAGATTGATGCTGCACATCAGCAAAGATGGGATGCTGTGCTTGTTAACCAGTATCTGTGTGATCTTAGGGAGGCAAAAAAGCAGGGTAGAAAAGAGAGAAGGCACAAGGAAGCACAGGCAGTGTTAGCTGCTGCAACTGCTGCTGCAGCAGCATCTTCTAGGGTTTCTTCATTCCGGAAGGACTCTTTAGATGAATCTGTGCAGTCAGAGAATTTGTTAAAGCATTCCTCCAGCGGGAGGACTGGTGTTGGCTCTCAGCCAATGCCACGGGCCAAAGAGACACTTTCAAGAGTAGCTGTGGCAAGGGCTTCGTCAGAAAAATATTCAGATTTTGGTCTTCCAAGCACAGATTTTTCTAAGGAGCATCCTAGATCGTGTGATATCTGCAGACGATCTGAGACTTTATTGAACCCTATTCTTGTTTGCTCTGGTTGCAAGGTTGCAGTTCACTTGGATTGCTATCGTAGTGTGAAGGAATTTACGGGTCCATGGTACTGTGAATTATGTGAAGATTTATCATCTAAACTATCTGGGGCACCTGCTATCAATTTCTGGGAGAAGCCTTATTTTGTCGCAGAATGTGGAATATGTGGTGGTACTACTGGTGCTTATAGGAAGTCTTTGGATGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGGTATTTGAGTCCACGTTCAGAAGAGGACAAGTTAATCCTGTTGAAGTAATGGAGACTGTGTTGAAAGGAGTTGATACTTGTTGCATCTGCCGCCGCAAGTATGGTGTATGCTTAAAGTGTAGTTATGGCCATTGTCAGACTGCATTCCATCCATCGTGTGCTAGAAGTGCTGGTTTTTACATGAATATCAGGACTGTCAGTGGCAAGCTGCAGCACAGGGCTTACTGTGAAAAGCATGGTTTGGAGCAGAGGGCAAAGGCTGAAAGTCAAAAACATGGAATTGAAGAGTTAAAAAGCATCAAGAAAATTAGGGTTGAACTAGAAAAATTGCGTCTCCTTTGCGAAAGAATTGTCAAACGTGAAAAAATAAAGCGGGAATTGGTTCTATGCTCACATGACATACTTGCCTTCAAAAGAGATCATGTTGCTAGGTCTGTCTTGGTTCGTAGCCCTTTCTTCCTTCCTGAGTGTAGTTCAGAATCAGCTACAACATCCCTTAAAGGGAACACGGAGGGAAACAGATCATGCAGTGAAGCAGTCCAAAGGTCGGATGATGTAACTGTGGACAGCTCAGTTTCTGCTAAGCATCGCCTAAGAGTTGCTGTAACCATGGACACTGACCCGAAGTTAGATGATGACTGTTCAACCTCACAAAGCCATTATAATCATAAGATTCCAGAGAGGGTCCAATTCTCTGGCAAGCAGATTCCTCATAGAGCTTCTGTTATATCACGTAATCTTTCTGATGATGGTGGATGGAGATCAAAATCAAGAAAACATGCAGAGACATTTGGGAAAGAGCTTGTAATGACGTCAGATGAAGCATCTATGAAGAATTTGATGTTACCTAAGGGGTATGCATATGTTCCTGCTGATTGCTTGACAAATGAGAAGCAGTCGAATCAGGACGTATTTTCTAGTGAACAGGTGGAACAGGACGGGTGA 4698 0.4289 MTGDRCHRRKKMMGRGAEGGCGTEERPCPVSRVPVKFPATQPGNSDNSTVLEIDYYSQARKALSERSPFDVAEETSTSTVSTLPTGLASFLNRHSESRRRHKKPHLGADKKSSRACEKLRSSSIWLETEEYFRDLKLPDIDTLLEASSSFSLAARKCFSIPLVGNAPGSNVVSNENDKETDENLNSEIVKNEDGAMEIDSVAAEVLPQDEKDYATSDYSSSLEWLLGCRNKISLTSERPSKKRKLLGGDAGLEKFSIASPCDGGSSLCHYCHRGDTSRESNQLIVCVICKVTVHKKCYGVQDDVDESWLCSWCKQKDDISEMVNPCVLCPKKGGALKPVHRSAESVGSLQFAHLFCCLWMPEVYIEDLNKMEPVMNIGGVKESRRKLVCNVCKVKFGTCVRCSHGSFQSCLLLLWTRCLLLMNLEPKCTSYPSKRKGENSLVRASFHPLCAREARHRMEIWAKNGYDNVELRAFCSKHSDVQESSIILPSGGSVSFGSEFSVANSPPVTSPAGGEHNLKIGCRNGDNIGIVSDASPDKSRHNNPQDGELSDCRFSACDMVECGGSPQLNNSGVMGRADDNVNASDSLGFALVLKKVFYNMSKLMRKHYVVNPKFKIAPWQLIDRGKVDVKEVALEIGISPDTLSANINESCMAPDVQRKIVNWLKDHVYTNTFQKSLKVKLKPPNSSKDEKGVTDGSDALPISDSDLPDPVAVKSVPPRRRTTSNIRILKDNKVICSSEVVSNENGMSMDKVKAGQSNNENSGTLNEASIPDTSEMHQLVCSPCTMGVILNRKHLLVKCLVRFSSYPGTGIKIEVLYESGFLLLSVFPSFIYILKLTKSEDTVPETQGNADKPYKSSLSGCVSEEKFANASILSEQHRSFCSASEPSSSGFMVCANEKNIGLYWGVGSKCSMNWLVGGCEKNPEGDPKSNWLSLLKARFHFMLCRKVEANSSYIHPTALTDSAFGSDICKADKVNMEQLIMARNMGVLESCPEDEVEGELIYFQHRLLQNTVARKKFANNLIYSIAKSLPWEIDAAHQQRWDAVLVNQYLCDLREAKKQGRKERRHKEAQAVLAAATAAAAASSRVSSFRKDSLDESVQSENLLKHSSSGRTGVGSQPMPRAKETLSRVAVARASSEKYSDFGLPSTDFSKEHPRSCDICRRSETLLNPILVCSGCKVAVHLDCYRSVKEFTGPWYCELCEDLSSKLSGAPAINFWEKPYFVAECGICGGTTGAYRKSLDGHWVHAFCAEWVFESTFRRGQVNPVEVMETVLKGVDTCCICRRKYGVCLKCSYGHCQTAFHPSCARSAGFYMNIRTVSGKLQHRAYCEKHGLEQRAKAESQKHGIEELKSIKKIRVELEKLRLLCERIVKREKIKRELVLCSHDILAFKRDHVARSVLVRSPFFLPECSSESATTSLKGNTEGNRSCSEAVQRSDDVTVDSSVSAKHRLRVAVTMDTDPKLDDDCSTSQSHYNHKIPERVQFSGKQIPHRASVISRNLSDDGGWRSKSRKHAETFGKELVMTSDEASMKNLMLPKGYAYVPADCLTNEKQSNQDVFSSEQVEQDG 1565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1613 1565 MobiDBLite consensus disorder prediction 1100 1122 - -
Bisa09g1613 1565 MobiDBLite consensus disorder prediction 1 15 - -
Bisa09g1613 1565 Pfam PHD-zinc-finger like domain 1224 1330 - -
Bisa09g1613 1565 Pfam PHD-zinc-finger like domain 325 421 - -
Bisa09g1613 1565 Pfam PHD-finger 1168 1201 - -
Bisa09g1613 1565 Pfam PHD-finger 281 314 - -
Bisa09g1613 1565 ProSiteProfiles Zinc finger PHD-type profile. 1154 1203 IPR019787 -
Bisa09g1613 1565 SMART PHD_3 267 314 IPR001965 -
Bisa09g1613 1565 SMART PHD_3 1277 1331 IPR001965 -
Bisa09g1613 1565 SMART PHD_3 1156 1201 IPR001965 -
Bisa09g1613 1565 ProSitePatterns Zinc finger PHD-type signature. 1157 1200 IPR019786 -
Bisa09g1613 1565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1135 1208 IPR013083 -
Bisa09g1613 1565 SUPERFAMILY FYVE/PHD zinc finger 255 333 IPR011011 -
Bisa09g1613 1565 ProSiteProfiles Extended PHD (ePHD) domain profile. 1222 1331 IPR034732 -
Bisa09g1613 1565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 320 435 IPR013083 -
Bisa09g1613 1565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1222 1332 IPR013083 -
Bisa09g1613 1565 PANTHER PHD FINGER PROTEINS 56 1096 - -
Bisa09g1613 1565 ProSitePatterns Zinc finger PHD-type signature. 268 313 IPR019786 -
Bisa09g1613 1565 ProSiteProfiles Zinc finger PHD-type profile. 265 316 IPR019787 -
Bisa09g1613 1565 MobiDBLite consensus disorder prediction 1413 1433 - -
Bisa09g1613 1565 CDD ePHD 1225 1330 - -
Bisa09g1613 1565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 259 319 IPR013083 -
Bisa09g1613 1565 MobiDBLite consensus disorder prediction 680 719 - -
Bisa09g1613 1565 SUPERFAMILY FYVE/PHD zinc finger 1146 1202 IPR011011 -
Bisa09g1613 1565 MobiDBLite consensus disorder prediction 1 48 - -
Bisa09g1613 1565 Coils Coil 1351 1371 - -
Bisa09g1613 1565 MobiDBLite consensus disorder prediction 85 114 - -
Bisa09g1613 1565 ProSiteProfiles Extended PHD (ePHD) domain profile. 323 479 IPR034732 -
Bisa09g1613 1565 MobiDBLite consensus disorder prediction 1100 1115 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1613 262 442 C2H2 Transcription Factor Family AT3G14740 30.435 9.96e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa09g1613 zf-HC5HC2H_2 2.1e-22 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1613 09 24025984 24037851 Bisa09g1613 09 24025984 24037851 ECH