Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1607 ATGGCCTTACAGAATATAGGTGCTTCAAACCGTGATGATGCCTTCTATAGGTACAAGATGCCAAAAATGATAACCAAGATAGAAGGTAGAGGAAATGGCATCAGGACTAATGTGGTTAACATGGTTGAGATTGCAAAGGCCCTAGCAAGACCTGCATCTTACACTACGAAGTATTTTGGTTGTGAGCTTGGAGCCCAATCAAAATTTGATGAGAAGACTGGAACTTCTCTTGTGAACGGGGCCCATGAAACTGCAAAGCTTGCAGGGTTACTAGAGAATTTCATTAAGAAATATGTTCAGTGCTATGGTTGTGGGAATCCTGAAACTGAGATAGTTATTACAAAGACACAAATGCTCAACTTAAAGTGTGCTGCTTGTGGGTTTATCTCTGATGTTGACATGAGGGACAAGCTTACAACTTTTATACTTAAGAATCCACCTGAGCAGAAGAAGGGATCAAAGGACAAGAAGGCCATGAGGAGGGCTGAGAAGGAGCGGCTTAAAGAGGGTGAGGCTGCTGATGAGGAACTAAGGAAGCTTAAAAAGGAAGGAAAGAAGAAAGGCTCTTCAGTTACCACAAAGGATGCTACTTCAAAGACATCAAAAAAGAAAAACACTGGTTCTGATGAGGATCAATCCCGTTCCTCCCCTGCTCATAGTAATGCTGATGAAAATGAGCAAGCTGATGAAGATGGCGATGATGTGGAATGGCAGACAGACACCTCATTGGAAGCGGTTCGGCAGCGCATTCAGGAGCAGTTAAGTGCTGTGACTGCTGATATGGTCATGCTTTCTACTGGCAGTGAAGAGAAGTCACCAAAACAAAAAGTGGCATCTGAGGATAAAGAGCATGGTAATGGTGTTGTTGTTAGTACTCATGAGAAGCTTGTTGAGGAAATAAAGGACCAATTGAAGAAGGGTGACTCTGCTGGTCAGCTTAAAACTTTTCTGGGTTCTCTGTCTGGCAGTTCTCAGGAAGTTGTTAATGCTTTGCTTGAAGCACTATTTGAGGATGTTGGCAAAGGATTTGCTAAACTAGCTTCAAAAAAGAAGAACTACCTTGCTGTGGCCGCTCAGTGTGGGGGATCTCAAATGGTTTTGTTGAATGCTTTAGAATGTTTTTGCGGGAAAGCAAACATGGAGGCAGTGAAGGAGGTTGCTTTGGTCTTGAAGGAGCTCTACGACTGTGATTTGCTGGAGGAGGAGTCTATACTTGAATGGTACCAGCAGGGCTTGGCTGGAAACAACAAGAGCTCGCAAATCTGGAAGAACGTCAGGCCCTTCATTGAATGGCTTCAGAATGCTGAGTCCGAATCTGAGGAAGAGTGA 1329 0.4379 MALQNIGASNRDDAFYRYKMPKMITKIEGRGNGIRTNVVNMVEIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEIVITKTQMLNLKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEELRKLKKEGKKKGSSVTTKDATSKTSKKKNTGSDEDQSRSSPAHSNADENEQADEDGDDVEWQTDTSLEAVRQRIQEQLSAVTADMVMLSTGSEEKSPKQKVASEDKEHGNGVVVSTHEKLVEEIKDQLKKGDSAGQLKTFLGSLSGSSQEVVNALLEALFEDVGKGFAKLASKKKNYLAVAAQCGGSQMVLLNALECFCGKANMEAVKEVALVLKELYDCDLLEEESILEWYQQGLAGNNKSSQIWKNVRPFIEWLQNAESESEEE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1607 442 MobiDBLite consensus disorder prediction 148 210 - -
Bisa09g1607 442 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 441 IPR045196 GO:0003743|GO:0006413
Bisa09g1607 442 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Bisa09g1607 442 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Bisa09g1607 442 Gene3D - 105 145 - -
Bisa09g1607 442 MobiDBLite consensus disorder prediction 265 286 - -
Bisa09g1607 442 SUPERFAMILY ARM repeat 294 436 IPR016024 -
Bisa09g1607 442 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Bisa09g1607 442 CDD W2_eIF5 291 440 - -
Bisa09g1607 442 SMART 542_3 351 438 IPR003307 GO:0005515
Bisa09g1607 442 Gene3D - 289 442 - -
Bisa09g1607 442 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Bisa09g1607 442 MobiDBLite consensus disorder prediction 143 235 - -
Bisa09g1607 442 ProSiteProfiles W2 domain profile. 279 442 IPR003307 GO:0005515
Bisa09g1607 442 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Bisa09g1607 442 Pfam eIF4-gamma/eIF5/eIF2-epsilon 364 442 IPR003307 GO:0005515
Bisa09g1607 442 Gene3D - 2 104 - -
Bisa09g1607 442 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1607 Bisa-ChrBisa09 23985610 23986938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1607 1 435 Eukaryotic Initiation Factors Gene Family AT1G77840 67.114 0.0 548