Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1568 ATGGCAGCTGCAATGGACTTCTGCAGCGGCACTCAAGCAGAGTCAGATTCCTTCAGGGGTGAACTAATGGAAGCTCTCCAACCTTTTATGAAGAGTGCTTACACCACTCCAACCCCCTCTTCCTCCTCAGTCTCTTCAGTCTCATCTCCTTCTTCAAATTTGTGTCTACCTTCTACTTCTTACTCTCCCTCTTCGTCTTCCAACGTGTTCTATTCCTCTGCTTCAGTCCCCGCCCTGCCCAATTTGTTTGAACATGGCTGCTTCCCCTCCATGACCCATCATGTATTTAGCGACGGGTTATCCAACAACCAAAATTTCATCGGTTTTGGGCAACCAAGTTCTGCTCTTGGGCTCAACCACCTATCCCCATCTCAGATTAACGAGATTCAAGCCCAGATCCACCTCCAGAACCACTGCCACCAGAATACCCTTAGCTTCTTGAGCCCCAAACCTGTTCCCATGAAGCAAACGGGCATGTGTCCTAAACCCATCAAGCTCTACAGAGGGGTCAGGCAACGGCATTGGGGGAAATGGGTCGCCGAGATCCGACTCCCGAAGAACCGGACCCGACTCTGGCTCGGTACCTTCGACACTGCCGAGGAAGCTGCCCTCGCCTACGACAAGGCCGCTTACAAGCTCCGAGGTGACTTTGCTAGGCTCAACTTCCCCAACCTCCGACACCAAGGTTCCACCGTTGGGGGCGAATTCGGGGAGTACAAGCCTCTACCTTCCTCTGTGGACGCCAAGCTTCAAGCGATTTGCGAAAACTTGGCTGAAATCCAGAAACAGGGGAAGTCAGAGAAACCGAAGAGGTCTTCGGGGCGGTCGAAGATGGGTTCGACAGAGGCTCAGCCGCAGGCGGTGGCGAGCGAGGTTGATTTGAAGGGTATGGAGAATTCTTCCAAGGTGGAAGCTTCCTCATCTCCGGTGATGACTGAGAGCGAGGAATCTGCGGGTTCTTCTTCCTTGTCGGATCTGAATTTCGCCGATTGCAATGAGCCACAATGGGAAAGTTCTATGGAAATCTTTAATCTGCAAAAGTTCCCATCTTATGAGATAGACTGGGCATCTCTGTGA 1077 0.52 MAAAMDFCSGTQAESDSFRGELMEALQPFMKSAYTTPTPSSSSVSSVSSPSSNLCLPSTSYSPSSSSNVFYSSASVPALPNLFEHGCFPSMTHHVFSDGLSNNQNFIGFGQPSSALGLNHLSPSQINEIQAQIHLQNHCHQNTLSFLSPKPVPMKQTGMCPKPIKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSTVGGEFGEYKPLPSSVDAKLQAICENLAEIQKQGKSEKPKRSSGRSKMGSTEAQPQAVASEVDLKGMENSSKVEASSSPVMTESEESAGSSSLSDLNFADCNEPQWESSMEIFNLQKFPSYEIDWASL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1568 358 Gene3D AP2/ERF domain 166 224 IPR036955 GO:0003700|GO:0006355
Bisa09g1568 358 SMART rav1_2 166 229 IPR001471 GO:0003700|GO:0006355
Bisa09g1568 358 Pfam AP2 domain 167 215 IPR001471 GO:0003700|GO:0006355
Bisa09g1568 358 MobiDBLite consensus disorder prediction 300 329 - -
Bisa09g1568 358 FunFam Ethylene-responsive transcription factor 2 165 224 - -
Bisa09g1568 358 CDD AP2 165 225 IPR001471 GO:0003700|GO:0006355
Bisa09g1568 358 SUPERFAMILY DNA-binding domain 166 224 IPR016177 GO:0003677
Bisa09g1568 358 PRINTS Ethylene responsive element binding protein signature 189 205 IPR001471 GO:0003700|GO:0006355
Bisa09g1568 358 PRINTS Ethylene responsive element binding protein signature 167 178 IPR001471 GO:0003700|GO:0006355
Bisa09g1568 358 ProSiteProfiles AP2/ERF domain profile. 166 223 IPR001471 GO:0003700|GO:0006355
Bisa09g1568 358 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 358 - -
Bisa09g1568 358 MobiDBLite consensus disorder prediction 261 329 - -
Bisa09g1568 358 MobiDBLite consensus disorder prediction 261 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1568 Bisa-ChrBisa09 23277172 23278248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1568 1 358 AP2-EREBP Transcription Factor Family AT1G78080 51.064 5.69e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa09g1568 AP2 8.2e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1046 05 17984645 17985751 Bisa09g1568 09 23277172 23278248 CCT
Bisa09g1568 09 23277172 23278248 Bisa09g1568 09 23277172 23278248 ECH