Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1566 ATGACGAACCGGAGTCTAATGGTTCCTGATGTGAAATCTGGTATTAACACTCTCATAGAGATGGCTATGTCCAATTTGAGCTCGACTTTGTTGCCCAGCGCAGCAGTGCCAGAGTCGCTGGGTGTGCTCGGTGAGTTTCTGGGGTTACCCCACAAAAAGCTACTCAAGAGGCTTGACGAAAGAGGAGGCAAAGCAGGTGGTGCTTTAGTTAATGCCTGGATTGATTCAATGAGAGCTTCCTCTCCTACACGACACAAATCCACCTTTCCATCCTCTCAAAACCAACTCTTGACTTCTTGGACTCTTCATCACCCTTCAGCGCTGGGCATGTTTGATGAGATAATATATAAATCCGAAGCAAAGCAAATTGTAATCTTTCTTGACTACGACGGAACTCTCTCCCCAATCGTTGCAGACCCTGACAAAGCATTCATGACTAAAAAGATGAGAGCAACAGTGAAGGACACAGCAAGACATTTTCCCACAGCCATCGTGAGCGGAAGGTGCAGAGACAAGGTGTACAAGTTTGTTAAACTGGCAGAGCTGTACTACGCAGGTAGTCACGGCATGGACATCCAGGGACCAACAAAAAGCCGAAGTGCGAATAAAGGTAATCAGGCAGTCGCCTTCCAGCCTGCCAGCCAATTCTTGCCCATGATCAATGAGGTGTACAAGATGTTGTTAGAAAAAACAAAGTCCGTGCCAGGGGCTATGGTGGAGAACAACAAGTTCTGCTTATCCGTGCACTTCCGTTGTGTTGACGAAAAGAGTTGGGGTGCATTGGCAGAGCAAGTTCGATTAGTTCTCAATCAATACCCACAGCTTCGGCTCACCCAAGGCCGAAAAGTGCTGGAGATCCGACCCACCATTAAATGGGACAAGGGCAAAGCTCTCGAATTTTTGTTACAATCTCTAGGATTTGCCAATTCTAAGGATGTCTTCCCCATCTATATTGGCGATGACCGAACTGACGAGGATGCTTTTAAGGTTCTACGCAGTAGAGGTGAAGGGATGGGGATTCTTGTATCCAAAGTTCCAAAGGAAACACAAGCTTGGTACACTTTACAAGACCCATCGGAGGTTGAGCAGTTCTTGCGGCGTTTGGTGGAGTGGAAAAGAAAGAGCGTCACTCCAAAACAGTAG 1143 0.4707 MTNRSLMVPDVKSGINTLIEMAMSNLSSTLLPSAAVPESLGVLGEFLGLPHKKLLKRLDERGGKAGGALVNAWIDSMRASSPTRHKSTFPSSQNQLLTSWTLHHPSALGMFDEIIYKSEAKQIVIFLDYDGTLSPIVADPDKAFMTKKMRATVKDTARHFPTAIVSGRCRDKVYKFVKLAELYYAGSHGMDIQGPTKSRSANKGNQAVAFQPASQFLPMINEVYKMLLEKTKSVPGAMVENNKFCLSVHFRCVDEKSWGALAEQVRLVLNQYPQLRLTQGRKVLEIRPTIKWDKGKALEFLLQSLGFANSKDVFPIYIGDDRTDEDAFKVLRSRGEGMGILVSKVPKETQAWYTLQDPSEVEQFLRRLVEWKRKSVTPKQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1566 380 Pfam Trehalose-phosphatase 126 359 IPR003337 GO:0003824|GO:0005992
Bisa09g1566 380 FunFam Trehalose 6-phosphate phosphatase 213 289 - -
Bisa09g1566 380 FunFam Trehalose 6-phosphate phosphatase 123 209 - -
Bisa09g1566 380 FunFam Trehalose 6-phosphate phosphatase 219 378 - -
Bisa09g1566 380 NCBIfam HAD-IIB family hydrolase 125 333 IPR006379 -
Bisa09g1566 380 Gene3D - 123 210 IPR023214 -
Bisa09g1566 380 Gene3D - 227 379 IPR023214 -
Bisa09g1566 380 CDD HAD_TPP 124 361 - -
Bisa09g1566 380 NCBIfam trehalose-phosphatase 120 369 IPR003337 GO:0003824|GO:0005992
Bisa09g1566 380 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 62 376 IPR044651 GO:0004805|GO:0005992
Bisa09g1566 380 SUPERFAMILY HAD-like 124 372 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1566 Bisa-ChrBisa09 23259210 23261230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1566 115 368 Trehalose Biosynthesis Gene Families AT1G70290 27.037 1.65e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1050 05 18008308 18011348 Bisa09g1566 09 23259210 23261230 CCT
Bisa09g1566 09 23259210 23261230 Bisa09g1566 09 23259210 23261230 ECH