Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1552 ATGGGAAGGTCCCCATGCTGCGATGAGAATGGACTCAAGAAAGGACCCTGGACTCCTGAAGAAGATGAAAAGCTTGTCCACTACATTCACAAACACGGCCATGGAAGTTGGAGAGCCCTCCCCAAGCTAGCTGGTCTCAACAGATGCGGAAAAAGCTGTAGGCTAAGGTGGACCAACTATTTAAGGCCTGACATCAAGAGGGGGAAATTTTCACAAGAAGAAGAGCAAACCATTCTCCACCTCCATTCCATCCTTGGAAACAAATGGTCAGCGATTGCATCCCATCTTCCTGGGAGGACGGACAATGAGATAAAGAATTTCTGGAACACTCATCTAAAGAAGAAGCTGATTCAGATGGGTTATGATCCAATGACACACCAGCCAAGAACTGACCTAGTTTCAACCCTGCCTTATCTGCTAGCTTTGGCCAACATGACAAACTTAATGGATCATCAATCATTGGACGAGCAATCCTTGAGGTTACAAGCAGAGGCAGTTCAGTTGGCCAAGCTTCAATACCTTCAATATTTACTCAATTCCACAACCTCCTTAAGTACCAACAACTCCTATGACCAGAGTGCCAATATCACAAACACAGAAGCTTTCAATTTGCTAACTTCAATCTCTAATGTCAATGAGATTGAGATCCCAGTTATAAACTGCCCACAAATTGATAATGCAGCCTCATTTTCTAATGGGATTGCTAGCTCCCAACCACTCCACCACCCAAACATGTTGTCTCACATTTCAGACCCACAAGTCTCTTTCAGTACTTCTCAATCATGTTTGAATAGTGACAAAAATCAAGGTACTAACTTTACAATGATTAATGAAGGGCATCACATAGATGTAGCTAATGACTCTTCTTGGGTTGTCCCATCTCCTGCTCCTTCAATTCCCCAAAATGTGACAGGGACCTCTGCAAATAGCAATCCTGGAGATGCCACCAGCTGCACTTCTAGCTATGGAGGAGGAACCTCATCCTTTTGGCATGAACTATTTCTAGAGGACCCAATTATCCATGACCTATCTTGA 1035 0.4377 MGRSPCCDENGLKKGPWTPEEDEKLVHYIHKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDLVSTLPYLLALANMTNLMDHQSLDEQSLRLQAEAVQLAKLQYLQYLLNSTTSLSTNNSYDQSANITNTEAFNLLTSISNVNEIEIPVINCPQIDNAASFSNGIASSQPLHHPNMLSHISDPQVSFSTSQSCLNSDKNQGTNFTMINEGHHIDVANDSSWVVPSPAPSIPQNVTGTSANSNPGDATSCTSSYGGGTSSFWHELFLEDPIIHDLS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1552 344 CDD SANT 69 112 IPR001005 -
Bisa09g1552 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 247 - -
Bisa09g1552 344 MobiDBLite consensus disorder prediction 293 321 - -
Bisa09g1552 344 CDD SANT 16 61 IPR001005 -
Bisa09g1552 344 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa09g1552 344 SMART sant 66 114 IPR001005 -
Bisa09g1552 344 SMART sant 13 63 IPR001005 -
Bisa09g1552 344 Gene3D - 69 116 - -
Bisa09g1552 344 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa09g1552 344 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa09g1552 344 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa09g1552 344 FunFam Transcription factor MYB39 69 130 - -
Bisa09g1552 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa09g1552 344 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa09g1552 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa09g1552 344 FunFam MYB-related transcription factor 13 66 - -
Bisa09g1552 344 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1552 Bisa-ChrBisa09 23066194 23067434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1552 1 344 MYB Transcription Factor Family AT1G34670 54.447 1.18e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa09g1552 Myb_DNA-binding 1.7e-17 CL0123