Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1545 ATGGCTTACCCACATTATCGATCACAGTTCGGCGACACAACATTCACCAAAGTGTTCGTCGGAGGATTAGCTTGGGAGACCCCCACCGAAGAAATGCGTAGATATTTCGAGCAGTTCGGAGACATTCTCGAGGCCGTTATAATCACCGATAAGAACACAGGAAAATCTAAAGGCTATGGATTCGTAACATTCCGTGATCCAGAATCAGCTACAAGGGCTTGTGCTGATCCAAATCCAGTAATAGATGGAAGAAGAGCAAATTGTAATATTGCCTCTCTGGGTCGGCCTCGGCCTTCCCCTCCCCGAGCGAGGAATATATATCCAGGTGGAGGCACAGCACAGAGTGCAGGGCCGTATGGAGGTGTTCCTCCGGCAGCAGTACCGCCGCCACCTCCGCCACCTCCGCCGCTGCATCATCTGATGTACCCGCCATATGGCTACCCAACCTACACTCCTGATTATGGGTACCACCAAGCGGCATTGTACAACACACAGATTCAACAGCCACAATACTATCAGCCATTTTATGGAGCATCATCTTCGGGGATGGGCTCCCCATATTACTATGGATATTCTGTGCAAGCAGCAAGAGGCACATATTCTACACCTCAAGCTCATCGCCTACCTCCTGCAGGACCATCCTATCTTTACTACCCTTACCCTACACCCTCACTCATGGAATCCTCCTCCTCTGCCTATCGTCCACCCCAACAACCAACAATACTAAGGCAGCCCTTTCCTTCCTCTACGGATTCAGAGTCACAGACGCAGCAGCATACATCCTCCGAGACAGCAGCTTCAGAAAGTCCAAATACCCAAGGGAAGAATTGA 831 0.5042 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESATRACADPNPVIDGRRANCNIASLGRPRPSPPRARNIYPGGGTAQSAGPYGGVPPAAVPPPPPPPPPLHHLMYPPYGYPTYTPDYGYHQAALYNTQIQQPQYYQPFYGASSSGMGSPYYYGYSVQAARGTYSTPQAHRLPPAGPSYLYYPYPTPSLMESSSSAYRPPQQPTILRQPFPSSTDSESQTQQHTSSETAASESPNTQGKN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1545 276 SUPERFAMILY RNA-binding domain, RBD 9 115 IPR035979 GO:0003676
Bisa09g1545 276 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Bisa09g1545 276 Gene3D - 3 107 IPR012677 -
Bisa09g1545 276 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 75 IPR000504 GO:0003723
Bisa09g1545 276 MobiDBLite consensus disorder prediction 226 276 - -
Bisa09g1545 276 FunFam RNA-binding protein 24-B isoform X1 3 112 - -
Bisa09g1545 276 CDD RRM_RBM24_RBM38_like 16 91 - -
Bisa09g1545 276 PANTHER BOULE-RELATED 6 263 - -
Bisa09g1545 276 SMART rrm1_1 17 89 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1545 Bisa-ChrBisa09 22953595 22956660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1545 12 92 C2H2 Transcription Factor Family AT2G19380 38.272 2.65e-14 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1545 09 22953595 22956660 Bisa09g1545 09 22953595 22956660 ECH