Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1544 ATGGAGCCCTCCGATTCAGTATCTAGCTCTTCTTATTACCTCCCTTCTTCACATGCTGATCCTGCTAATTCAAATTCCAATCTTTTTCCTGCCATGAACCATAATCATCAGCTTCAGCCCCTCCCTCTGCTTAGCAGCTTCCTTGGTTCAACTTCAACCCCTCTTACCTCAAAACCTTATCAGGATAATGAAGAGGATGTCACAGTGGCATTACACATAGGCCTTCCACATAATTCCACCACTTCTTCTTCTTCCAATCCCAAAGGAAGACTCAATCAAACCCAGGTGCCTCGAAATTACTGGATTCCAACCCAAGAGCAGATTCTCATTGGTTTCAGCCATTTCTCCTGCCCTGTCTGCCTCAAAACCTTCAACCGCTACAACAATCTTCAGATGCATATGTGGGGACATGGATCACAGTACAGGAGAGGGCCGGAGTCTTTGAAGCGGACACATCCAAGGCCACTGTTGGACATTCCTTGTTATTGTTGCTCAAGAGGATGCAAGAACAACATAGAGCATCCAAGGTCTAAGCCATTGAAGGACTTTAGGACGCTACAGACGCACTACAAGAGGAAGCATGGGACCAAGCCCTTCATGTGTCGGAAGTGTGGGAAGCCTCTGGCTGTGAAGGGTGACTGGCGTACTCATGAGAAGAACTGTGGGAAGCGTTGGCTTTGTGTTTGTGGGTCTGACTTCAAACACAAGAGATCGCTCAAAGACCATATCAAAGCCTTTGGCTCTGCTCATTACCCTTTCTCTTCTTCCTCTGATGCCATGTAA 783 0.47 MEPSDSVSSSSYYLPSSHADPANSNSNLFPAMNHNHQLQPLPLLSSFLGSTSTPLTSKPYQDNEEDVTVALHIGLPHNSTTSSSSNPKGRLNQTQVPRNYWIPTQEQILIGFSHFSCPVCLKTFNRYNNLQMHMWGHGSQYRRGPESLKRTHPRPLLDIPCYCCSRGCKNNIEHPRSKPLKDFRTLQTHYKRKHGTKPFMCRKCGKPLAVKGDWRTHEKNCGKRWLCVCGSDFKHKRSLKDHIKAFGSAHYPFSSSSDAM 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1544 260 Gene3D Classic Zinc Finger 114 137 - -
Bisa09g1544 260 FunFam zinc finger protein WIP2-like 114 137 - -
Bisa09g1544 260 Pfam Zinc finger, C2H2 type 115 134 IPR013087 -
Bisa09g1544 260 FunFam Zinc finger protein WIP2 168 250 - -
Bisa09g1544 260 SUPERFAMILY beta-beta-alpha zinc fingers 184 219 IPR036236 -
Bisa09g1544 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 115 142 IPR013087 -
Bisa09g1544 260 PANTHER ZINC FINGER PROTEIN WIP2 10 254 IPR043584 GO:0003700|GO:0010468
Bisa09g1544 260 SUPERFAMILY beta-beta-alpha zinc fingers 110 137 IPR036236 -
Bisa09g1544 260 ProSitePatterns Zinc finger C2H2 type domain signature. 117 137 IPR013087 -
Bisa09g1544 260 Gene3D Classic Zinc Finger 158 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1544 Bisa-ChrBisa09 22950712 22951602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1544 27 256 C2H2 Transcription Factor Family AT1G34790 57.471 6.48e-103 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa09g1544 zf-C2H2 0.004 CL0361