Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1515 ATGGCACTAGAGGCTATAGTTTTCCCCCAGGACCCATTATTCTCATACAGTAGCAAGGACTTGTACTGCTTAGCTTGGAACCACGACGACTATGGGTTCCAAGCAGAAGAAGAGAAGGCCCAGCTTGTTGGACTCATCAACGATAACGCAAACACAGAGCAGAGAGGTCACGTGCATGCAACAACTTGGGATTCTTCTTCCCCTGAGGCCTGTGCTGCTCTCCCTTCACTTTCCCCTTCCACGGGACGCCGTAAACGACGTCGCACCAAGAGCCCCAAGAACAAGGAGGAAATAGAGAACCAGAGGATGACTCACATTGCAGTGGAGCGCAATCGACGAAAACAGATGAACGAGTACCTGGCAGTGCTCCGATCCTTGATGCCTCCTTCTTATGTTCAAAGGGGGGACCAAGCCTCTATAATAGGAGGTGCCATTAACTTCGTGAAGGAGCTCGAGCAGCTATTGCAGTCCATGGGGGGACAGAGGAAGACGCAGCAACAAGAGCACGAGAATGGAGGAGGGAGCTCCTCACCCTTCTCTGAGTTCTTCAGCTTCCCACAGTACACCACGCATTCCAACCAGTGGGCCGTGGCAGACATAGAAGTCACCATGGTAGACTCTCACGCAAACCTCAAGATACTCTCAAAGAAACGACCAGGCCAGCTCACCAAGATGGTCGTCGGCCTTCAGAATCTCAGGCTTACCGTTCTCCACCTAAATGTTTCTGCTGCCGACGACATGGTCCTTTACTCTGTTAGTGTCAAGATTGAGGAAGGGTGTGAGCTGAACACGGTGGATGAAATAGCTTCTGCTGTGAATCAACTATTGCGTAGAATCCAAGAGGAAGCCGCTTTCACCTGA 861 0.5122 MALEAIVFPQDPLFSYSSKDLYCLAWNHDDYGFQAEEEKAQLVGLINDNANTEQRGHVHATTWDSSSPEACAALPSLSPSTGRRKRRRTKSPKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQSMGGQRKTQQQEHENGGGSSSPFSEFFSFPQYTTHSNQWAVADIEVTMVDSHANLKILSKKRPGQLTKMVVGLQNLRLTVLHLNVSAADDMVLYSVSVKIEEGCELNTVDEIASAVNQLLRRIQEEAAFT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1515 286 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 100 151 IPR011598 GO:0046983
Bisa09g1515 286 SMART finulus 106 157 IPR011598 GO:0046983
Bisa09g1515 286 Coils Coil 148 168 - -
Bisa09g1515 286 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 100 169 IPR036638 GO:0046983
Bisa09g1515 286 PANTHER MAX DIMERIZATION, MAD 59 283 - -
Bisa09g1515 286 FunFam Basic helix-loop-helix transcription factor 91 166 - -
Bisa09g1515 286 MobiDBLite consensus disorder prediction 60 99 - -
Bisa09g1515 286 Coils Coil 35 55 - -
Bisa09g1515 286 MobiDBLite consensus disorder prediction 157 177 - -
Bisa09g1515 286 CDD bHLH_AtFAMA_like 103 168 - -
Bisa09g1515 286 MobiDBLite consensus disorder prediction 60 74 - -
Bisa09g1515 286 Gene3D - 84 174 IPR036638 GO:0046983
Bisa09g1515 286 Pfam Helix-loop-helix DNA-binding domain 101 152 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1515 Bisa-ChrBisa09 22453746 22454872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1515 1 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 50.847 2.96e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa09g1515 HLH 5.6e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1109 05 19061172 19062321 Bisa09g1515 09 22453746 22454872 CCT
Bisa09g1515 09 22453746 22454872 Bisa09g1515 09 22453746 22454872 ECH