Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1514 ATGACAGTCCACAGAGACACTCATCCTCCTCCTTCTACCATTCCCACACCCTCCAATTTTGTTCATCATTATCATCATCATGGACTCCGGTGGGTTGCTCTGTTTCTACTTCTCTCGTCGGCCACCGCCCAGCTCTCGAATACGGTGCCGCCGTCGCCACCGCCACCGGATCCGTTTTCCAGATTGAGGTTCGACAGGAATATGGCCATCATCATGGTGGTCCTGGTGGTTGTGTTCTTCATCTTGGGCTTTCTCTCCGTGTATACTCGCCAGTGCGCAGAGCAACGGCTCAGGGGAAGACTGGACCTGACGCTGCCAATGGGCGTGAGCGGGCGGCGACCGCGCGGGCTGGAGCAGGAGATAATCGACGCCTTTCCCACTTTCGTGTACTCCGGCGTGAAGGGGCTCAAGATGGGAGCGAGCGCACTGGAATGCGCCGTCTGCTTGAACGAATTCCAAGACGATGAAACGCTGCGTTTGATCCCCAAATGCAGCCACGTCTTTCATCCCCATTGCATCGATATCTGGTTGTCTTCTCACTCCACCTGTCCCCTCTGCCGGGCCAACCTTATTCCAAGACCGGGCGAAACCTCCTTCGTCGCCGTTCAGATCCCCAGTCCGAGCGTCCAATCCCCAGAACCCGACCCGAGACCCGAACCCCGCGAAGAAGACAATAGTAATAGGAATAGAGTGGAAGCAGAGTGTGGGAATGGGTCAAGGTCGTTATTAGGACGGAGTCACTCGACGGGACACTCGTTGGAGGTTGAAGGGGGACAGAATTGGGAAAGGTTCACTCTCAGGTTACCGGAGGAGGCACGGAAGCAGCTAGTAAACCGTACAAATAGCTGCGTGATGTTGAGGAGAGAGAGGAGCGAGAGGAGGGGTTATAGGACGAGAAGCGTAGGGAGCTCTTTGCAGGACGAGGGGAGGCCGGAGCGGTGGGGCTTCACGATGAGGCCGCCGTTTTTTGGTCGGACTGCTTCCAACAGAGCACCGACGGGGCCGTCGGCGGTGGCCATGGACAACGTCGGCGAACGATCTTCTGATCCATTGTTTCCGGGGAACAAAGATTAG 1074 0.567 MTVHRDTHPPPSTIPTPSNFVHHYHHHGLRWVALFLLLSSATAQLSNTVPPSPPPPDPFSRLRFDRNMAIIMVVLVVVFFILGFLSVYTRQCAEQRLRGRLDLTLPMGVSGRRPRGLEQEIIDAFPTFVYSGVKGLKMGASALECAVCLNEFQDDETLRLIPKCSHVFHPHCIDIWLSSHSTCPLCRANLIPRPGETSFVAVQIPSPSVQSPEPDPRPEPREEDNSNRNRVEAECGNGSRSLLGRSHSTGHSLEVEGGQNWERFTLRLPEEARKQLVNRTNSCVMLRRERSERRGYRTRSVGSSLQDEGRPERWGFTMRPPFFGRTASNRAPTGPSAVAMDNVGERSSDPLFPGNKD 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1514 357 CDD RING-H2_EL5-like 144 187 - -
Bisa09g1514 357 PANTHER RING FINGER DOMAIN-CONTAINING 47 201 - -
Bisa09g1514 357 FunFam E3 ubiquitin-protein ligase ATL6 107 193 - -
Bisa09g1514 357 ProSiteProfiles Zinc finger RING-type profile. 145 187 IPR001841 -
Bisa09g1514 357 MobiDBLite consensus disorder prediction 215 230 - -
Bisa09g1514 357 MobiDBLite consensus disorder prediction 204 254 - -
Bisa09g1514 357 SMART ring_2 145 186 IPR001841 -
Bisa09g1514 357 Pfam Ring finger domain 144 187 IPR001841 -
Bisa09g1514 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 192 IPR013083 -
Bisa09g1514 357 MobiDBLite consensus disorder prediction 292 357 - -
Bisa09g1514 357 SUPERFAMILY RING/U-box 139 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1514 Bisa-ChrBisa09 22418444 22419517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1514 23 343 Rapid Response to Elicitors AT3G05200 38.873 1.63e-66 213