Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1500 ATGGAGTTTGCTGAGCATGAGCAGGAGCACGAAGAGGTAGAGGAAGAGATGGGGATTCCGGTGCCGCCGTCGGGTTACGACTCGGGTCGGTCAAAAATGGGTGACTCCGTCGGGGCCGATGGAGGGGCATCCAGGAAAGGCAGCTCAACGGGGACAATCAGGTACCGAGAGTGTCAGAAGAACCACGCCGTCAGCATCGGCGGCCACGCCGTTGACGGTTGCTGCGAGTTCTTGGCGGCGGGAGAGGAAGGCACGCTCGACGCTCTTAAATGCGCCGCCTGTAACTGTCACCGCAACTTTCACCGTAAGGAGATTGACGGAGAAATGAGCTCCTACCACCAGCTGCAGCCGCCGCCGCCGCCGCCACAGCCACACCATCACCAGTACCACCATCAATTCCCCCCTTACTACCGCGCGCCACCGCCTCCAGGGGCCGGATACCTCCACCACCATTTGACATCTTCGGCGATGGCACATCACCGGCCATTGGCCCTACCTCCGGCTGCATCCGGAGGGGGACTGAGTAGAGACGAGGAAGACATGTCGAATCCGAGTAGCAGCGGAGGCGGGGGGTTCGGTAGCGGAGGAGGGAGTGGCAGTGGAAGGAAGAAAAGGTTCAGATCGAAGTTCACGCAGGAGCAGAAGGAGAAGATGCTGGCATTTTCGGAGAGGGTAGGGTGGAGAATCCAGAAGCACGACGAAGCTGCGGTGGAGGAATTCTGTGCGGAGACTGGTGTCAGGAGACAAGTGCTCAAGGTGTGGATGCACAATAACAAGCATACTCTCGGTAAGAAACCCTAA 801 0.5905 MEFAEHEQEHEEVEEEMGIPVPPSGYDSGRSKMGDSVGADGGASRKGSSTGTIRYRECQKNHAVSIGGHAVDGCCEFLAAGEEGTLDALKCAACNCHRNFHRKEIDGEMSSYHQLQPPPPPPQPHHHQYHHQFPPYYRAPPPPGAGYLHHHLTSSAMAHHRPLALPPAASGGGLSRDEEDMSNPSSSGGGGFGSGGGSGSGRKKRFRSKFTQEQKEKMLAFSERVGWRIQKHDEAAVEEFCAETGVRRQVLKVWMHNNKHTLGKKP 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1500 266 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 41 262 - -
Bisa09g1500 266 MobiDBLite consensus disorder prediction 114 128 - -
Bisa09g1500 266 MobiDBLite consensus disorder prediction 110 149 - -
Bisa09g1500 266 MobiDBLite consensus disorder prediction 163 215 - -
Bisa09g1500 266 SUPERFAMILY Homeodomain-like 190 264 IPR009057 -
Bisa09g1500 266 Pfam ZF-HD protein dimerisation region 53 105 IPR006456 -
Bisa09g1500 266 MobiDBLite consensus disorder prediction 1 51 - -
Bisa09g1500 266 FunFam Zinc-finger homeodomain protein 2 194 264 - -
Bisa09g1500 266 Gene3D - 190 263 - -
Bisa09g1500 266 NCBIfam homeobox domain, ZF-HD class 203 259 IPR006455 -
Bisa09g1500 266 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 55 104 IPR006456 -
Bisa09g1500 266 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 54 105 IPR006456 -
Bisa09g1500 266 MobiDBLite consensus disorder prediction 179 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1500 Bisa-ChrBisa09 22084087 22084887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1500 9 262 ZF-HD Transcription Factor Family AT4G24660 53.516 1.78e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa09g1500 ZF-HD_dimer 2.5e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1133 05 19290898 19291662 Bisa09g1500 09 22084087 22084887 CCT
Bisa09g1500 09 22084087 22084887 Bisa09g1500 09 22084087 22084887 ECH