Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1481 ATGCTTCCCTTTCGGAGTTTCAACGGGTATGAAAACTGGTTAAATAATTGTGATCATCATTATCTTCAAGAACCGAGCCCGTTGATCAAACCGGTGGAACTGGACGGTGGGAGATCGAGTCTGAGCTCCGCATCAAAGTCGGAGAGGAAATCAGATGAAGCATGCAAGAGTCACAGGGAAGCTGAGAGGAGACGCCGTCAGCGAATCAACGCCCACCTCTCCACTCTACGTTCTCTCCTCCCTAACGCCGTCAAGTCAGATAAGGCTTCGTTGCTAGCGGAAGTGGTCCAACACGTGAAAGAGCTGAGGAAACAGGCGAATGACGTGGCGCGTCGTCACAACGGTTACTTTTCATGCATTGGCAGCGACCAATCATTGTCGGATCGGACATCCGGCACTGAGTCGTGGCCGTTCCCGGACGAGTCCGACGAGGCAATTCTGAGCTATTGCGAGGGTGCTGGGGAGCCCAAGCTAATGAAAGCCACGGTGAGCTGCGAGGACCGGCCCAACCTGAACCGGGATCTAACCCACGCGATACAGTCGGTTCGTGCCAAAGCGGTTCGGGCGGAGATGATGACTGTTGGTGGCCGGACGAAGAGTGTTATTATAATGCAGTGGCCTGATGAGGGAGAAGAAAAAGTTGGAGCGCTGGAACGGGCTTTGAAGGCTGTGGTGGAGAATCGGGCGTTGGTGAGTTCTGGGCTGGGTCAGATGGTCTTGGGCAATAAACGCGCACCAGAAATTTAG 747 0.5395 MLPFRSFNGYENWLNNCDHHYLQEPSPLIKPVELDGGRSSLSSASKSERKSDEACKSHREAERRRRQRINAHLSTLRSLLPNAVKSDKASLLAEVVQHVKELRKQANDVARRHNGYFSCIGSDQSLSDRTSGTESWPFPDESDEAILSYCEGAGEPKLMKATVSCEDRPNLNRDLTHAIQSVRAKAVRAEMMTVGGRTKSVIIMQWPDEGEEKVGALERALKAVVENRALVSSGLGQMVLGNKRAPEI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1481 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 113 IPR036638 GO:0046983
Bisa09g1481 248 Pfam Helix-loop-helix DNA-binding domain 55 102 IPR011598 GO:0046983
Bisa09g1481 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 53 102 IPR011598 GO:0046983
Bisa09g1481 248 PANTHER TRANSCRIPTION FACTOR BHLH30 42 244 IPR045847 GO:0003700|GO:0006355
Bisa09g1481 248 Gene3D - 46 114 IPR036638 GO:0046983
Bisa09g1481 248 Coils Coil 92 112 - -
Bisa09g1481 248 SMART finulus 59 108 IPR011598 GO:0046983
Bisa09g1481 248 MobiDBLite consensus disorder prediction 45 67 - -
Bisa09g1481 248 MobiDBLite consensus disorder prediction 32 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1481 Bisa-ChrBisa09 21707351 21708165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1481 7 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 34.583 4.30e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa09g1481 HLH 3e-11 No_clan