Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1466 ATGAACCCGCGTTTCCTCTGCGCACTATTGTCCTTCTTGTGCGCAGTGCGCACCTCATCGCTTATGTGTCGCGAACCTGGAGTGAAGCGCAGATATATCTGCGTTAAGGAAGAAAGACGGGGAGAGCAACGGCGACGGAGAATAGTTTGGACTTGGGTTCGTGCATCTGCGGCTGTAGGATCGTGTGGGTTGGTGGTTGATCGAACTCTCGCGCGCAAGGCTCTCGTGATTTTTTTTTTTTTGAAAAAAATGCCTCACAGAGCGACTTACATTTTCCCGAGGCAATTCCCGGACCGTAGATTGGATGAATCTTCCAAGCAACTACTTGATCACGAGAAGAAGAAGATCTTCGAGTCCATCAAATCAGGAACCTATAGCGTTGAAAGTGACGGCCCAAAAAAGCCACCACTATCAACTAAAAAGGATGACGTCTTTTTCTCGTCTAGTAAACAGTCGGCTGTATCCGACCTTTTCACGGGCGGTGACAAACTAAATCTGAAGAAAAACAAGCAAATTGCTGATTTCTGCGAATGGTTAATCGAGAAAAAGAGCGGAAGATCGGGTCACGTGAAATCGTACTCTCCCAAGTTTTCCAGAGAGGAAGAACGCGAGCTTCTGCTTCCGCCAGAGTCCGTGCCGGCACCGCCACCGCCACCGCCGGAGGCAGTGAAGGACACTGCCATTGACCGGAGTTTCGATCGAGAGGTGTCGTTGCCGAGGTTGTCCAGTATTGAGAGTAGCTATGCTGGGAGCTTGTTCTCGGGGACGACGTTGGATGGCATTTTTTCGAGCGACATTAAGGAGGAGACGTCGTCGGTCTTCACCACAAAGAGGAAGCAAGAGGAAGGTGATGGAGAGAGTAAAGAGAGGATGGCGCAGAAGTCTAAAGAGAGTTACTACCTGCAACTTACGTTGGCTAAGAGGCTTACTTGTCTGGCAAACATTGCTGCCGAGCCTGTGCTTACTCTGGATACTAAACTCGAAATTTGGGATGCCGAAACCGTTTCTTATCGTTTATGGGTGAGTGGCTGTTTATCGTACTCTGACAAGATATCGGACGGTTTTTATAACATACTGGGGATAAATCCGTACCTGTGGGTAATGTGTAATGAAGGGGAGGAAGCTAGGCGGCTTCCACCTCTCATGGCGCTTAAGGCAGTTGAACCAAGCGAGACATCCATGGAGGTGGTTCTCGTTGACATACACAAGGACTCTCGGCTAAAGCAACTTCAGGATAAAGCACAAGAATTGAATTTTGCTTCAGAGAACACGCTGGTGTTGGTGGAAAAACTTGGAAAACTTGTCGCCGTATGTATGGGGGGTACCTTTCCGGTTGAGCAAGGAGATCTTCACAGGCGCTGGAAGTTGGTTAGTAAGAGATTGAGGAATTTTCACAACTGTGTTGTGCTTCCTATCGGTAGCCTATCTTCTGGACTTTGTAGGCATCGGGCAATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCATGTCGTATTGCTAGAGGTTGCAGGTATTGTGCTGCAGACTATAGATCCTCTTGTCTTGTCAAGATTGACGACGACAAGCATATCTCTAGGGAATATGTAGTTGATCTAGTAGGGGAACCAGGAAATGTCCATGGACCGGATTCCTCAATTAATGGAGCATATGTCTCTTCAACCCCTTCCCCACTTCAATTTTCTCATCTAAAAGAATCTCAATCACCTTGCATGGATGGTGCACCTTGTTCTCAATCTGTGAATTCCAATCATAGTCCTGCCGTTCGTCAAAGTCATTTATATTCAGGCTGTGGACGGAAAGGTCAACAAGTTAATGAAACTGATATGTTGAAAATTCCCAAGGGCTCCATTTATGCTTCAGTTGATGAAACTTCTGAAGGAACAGAACCTCCTTTAATTCCTTTTGGCTTGAAAGGGAATGCTGAGAAATGTGCAGTTCTAGGTTCAATATTGCCTTCCATCTGGGAAGGTGTTTCTGAGGCTCTGCATCCACCTATTGAGGCATCATTATATGAATATCCCAGGCTTGGTGAAGCTACAGTTCTAGTACAGGAAACTTCCACCAATGAGATCATCTTAACTGAAAGTTCTGTGGTTAAAAGTACTTTAAAACAATCTATATTGAGCTCTCCAAGCCAGTCAGAACCTGAGATGGTAAACAATAGGCCTGAAAACCAGGGTGATTTTCCTGCCGGGAATATTCCAAGATACTTGAATATTGAACCATCACTTGCAATGGACTGGCTTGAGATATCATGGGATGATTTACGCATCAGAGAGCGTGTTGGTGCTGGCTCATTTGGGACAGTGCACCGTGCTGAATGGCATGGATCAGATGTTGCAGTCAAGGTTTTATCAGTTCAGGATTTCCAAGATGATCAGTTGAGAGAGTTTCTGAGAGAGGTTGCAATAATGAAACGTATACGCCATCCAAATGTGGTCCTATTCATGGGTGCCGTTACAAAGTGCCCTCATCTATCCATAGTGACAGAATATTTGCCTCGGGGTAGTTTATACCGACTGATACATAGACCTACATCTGGTGAAAATCTGGATCAAAGGAGAAAATTACGGATGGCTTTAGATGTGGCTAAAGGAATCAATTATCTCCACTGTCTGAACCCTCCGATTTTGCACTGGGATCTCAAATCTCCAAACTTGTTAGTGGACAAAAATTGGACTGTGAAGGTGTGTGATTTTGGACTGTCGAGATTCAAGGCAAACACTTTCATATCATCAAAATCTGTTGCTGGGACGCCTGAGTGGATGGCTCCTGAGTTTCTTCGTGGGGAACCTTCAAATGAGAAGTCTGATGTTTATAGTTTTGGAGTCATCCTGTGGGAACTTGTGACCATGGAACAACCATGGAGTGGCCTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTTGTTATCCCTCCAAACATCTCTCCAGCATTGGCCTCTCTCATGGAATCTTGTTGGGCTGATGACCCTAATGAACGCCCATCTTTCTCTAACATAGTTGACTCGCTAAAGAAGCTGTTGAAATCTCCAGCAGAGGCCATAAAAATGGGTGGGAAATAA 3084 0.4575 MNPRFLCALLSFLCAVRTSSLMCREPGVKRRYICVKEERRGEQRRRRIVWTWVRASAAVGSCGLVVDRTLARKALVIFFFLKKMPHRATYIFPRQFPDRRLDESSKQLLDHEKKKIFESIKSGTYSVESDGPKKPPLSTKKDDVFFSSSKQSAVSDLFTGGDKLNLKKNKQIADFCEWLIEKKSGRSGHVKSYSPKFSREEERELLLPPESVPAPPPPPPEAVKDTAIDRSFDREVSLPRLSSIESSYAGSLFSGTTLDGIFSSDIKEETSSVFTTKRKQEEGDGESKERMAQKSKESYYLQLTLAKRLTCLANIAAEPVLTLDTKLEIWDAETVSYRLWVSGCLSYSDKISDGFYNILGINPYLWVMCNEGEEARRLPPLMALKAVEPSETSMEVVLVDIHKDSRLKQLQDKAQELNFASENTLVLVEKLGKLVAVCMGGTFPVEQGDLHRRWKLVSKRLRNFHNCVVLPIGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCAADYRSSCLVKIDDDKHISREYVVDLVGEPGNVHGPDSSINGAYVSSTPSPLQFSHLKESQSPCMDGAPCSQSVNSNHSPAVRQSHLYSGCGRKGQQVNETDMLKIPKGSIYASVDETSEGTEPPLIPFGLKGNAEKCAVLGSILPSIWEGVSEALHPPIEASLYEYPRLGEATVLVQETSTNEIILTESSVVKSTLKQSILSSPSQSEPEMVNNRPENQGDFPAGNIPRYLNIEPSLAMDWLEISWDDLRIRERVGAGSFGTVHRAEWHGSDVAVKVLSVQDFQDDQLREFLREVAIMKRIRHPNVVLFMGAVTKCPHLSIVTEYLPRGSLYRLIHRPTSGENLDQRRKLRMALDVAKGINYLHCLNPPILHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMEQPWSGLSPAQVVGAVAFQNRRLVIPPNISPALASLMESCWADDPNERPSFSNIVDSLKKLLKSPAEAIKMGGK 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1466 1027 SMART serkin_6 757 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1466 1027 ProSiteProfiles Protein kinase domain profile. 757 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1466 1027 MobiDBLite consensus disorder prediction 710 731 - -
Bisa09g1466 1027 MobiDBLite consensus disorder prediction 209 223 - -
Bisa09g1466 1027 Pfam Protein tyrosine and serine/threonine kinase 758 1011 IPR001245 GO:0004672|GO:0006468
Bisa09g1466 1027 Gene3D Phosphorylase Kinase; domain 1 750 834 - -
Bisa09g1466 1027 MobiDBLite consensus disorder prediction 187 224 - -
Bisa09g1466 1027 CDD STKc_MAP3K-like 763 1011 - -
Bisa09g1466 1027 SUPERFAMILY Protein kinase-like (PK-like) 736 1010 IPR011009 -
Bisa09g1466 1027 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 328 1016 - -
Bisa09g1466 1027 Gene3D Transferase(Phosphotransferase) domain 1 836 1023 - -
Bisa09g1466 1027 MobiDBLite consensus disorder prediction 187 207 - -
Bisa09g1466 1027 FunFam Serine/threonine-protein kinase isoform 1 747 835 - -
Bisa09g1466 1027 FunFam Serine/threonine-protein kinase CTR1 836 1021 - -
Bisa09g1466 1027 ProSitePatterns Protein kinases ATP-binding region signature. 763 784 IPR017441 GO:0005524
Bisa09g1466 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 878 890 IPR008271 GO:0004672|GO:0006468
Bisa09g1466 1027 Pfam Ethylene-responsive protein kinase Le-CTR1 332 540 - -
Bisa09g1466 1027 PRINTS Tyrosine kinase catalytic domain signature 982 1004 IPR001245 GO:0004672|GO:0006468
Bisa09g1466 1027 PRINTS Tyrosine kinase catalytic domain signature 938 960 IPR001245 GO:0004672|GO:0006468
Bisa09g1466 1027 PRINTS Tyrosine kinase catalytic domain signature 831 844 IPR001245 GO:0004672|GO:0006468
Bisa09g1466 1027 PRINTS Tyrosine kinase catalytic domain signature 872 890 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1466 Bisa-ChrBisa09 21342878 21355619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1466 84 1026 MAP Kinase Kinase Kinase AT4G24480 58.291 0.0 1077
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bisa09g1466 PK_Tyr_Ser-Thr 1.6e-65 CL0016