Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1462 ATGGCAGCCGTGAATCCACAACCTTTGCAGGCGCGTCCGTTCGAGGAACATGTGGGAGGCCCAATCCCGATAGAGGATGATGATGATGACTGTGAGGATGGTGGGGGTAGTGGAGTTGGTAGTGGCGATGCTATGGATGACTTGGAAGAGGCCAATGTTAATTCAGTGACTGTTGCAAACCATGGGGGAGTTGTCATGACATCCCGTACTAGTGAGCTCACTCTTTCTTTCGAGGGTGAGGTTTACGTGTTTCCTGCGGTGACACCTGAGAAGGTGCAAGCAGTTTTACTGCTTTTGGGAGGACGTGATGTGCCTGCAGGTGTTCCCACTGTTGAAGTACCATTTGATCAAAGTAACAAGGGCATGGGTGACACTCCAAAGCGTTCAAATCTTTCGAGAAGAATAGCCTCCTTGGTTAGGTTCCGTGAAAAACGCAAGGAAAGATGTTTTGACAAGAAGATTAGGTATACTGTGCGTAAAGAGGTGGCACAGAGGATGCATCGTAAGAATGGGCAGTTTGCATCATTGAAAGAAAGTCCAGGTTCTTCTAATTGGGATTCTGCAGAGAGCTTTCGTCAGGATGGCAATTCTCACTCTGAAACTCTACGTAGATGTCAACATTGTGGTGTAAGTGAAAACAATACTCCTGCAATGCGTCGTGGACCAGCTGGACCAAGGACTTTATGCAATGCATGTGGCCTTATGTGGGCAAATAAGGGAACACTAAGAGATCTCAGTAAGGGAGGAAGAAATATTTCCATTGAGCAAAGTGAATCGGATACCCCTATTGATGTGAAGCCTGCTGTTCTGGAAGGAGAATTGCCTGGCCTCCATGACAAGCAAGGAATTTCCGAAGGTCCTTCTAAGGCTGTTGCTGAAGGATCTAATAATCATGCTGTTAACCCCAGCGATGAGGAATTGCAATCTACTGAGCACTTCTCAAACTCACTGCCATTGAGCATTCTTCATTCTTCGACAAATGATGATGGGCAGGAACCTCTGGTTGAGCTCTCAAATCCATCTGACACAGATATTGACATTCCTGGAAACTTTGATTAG 1059 0.4636 MAAVNPQPLQARPFEEHVGGPIPIEDDDDDCEDGGGSGVGSGDAMDDLEEANVNSVTVANHGGVVMTSRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPAGVPTVEVPFDQSNKGMGDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESPGSSNWDSAESFRQDGNSHSETLRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNISIEQSESDTPIDVKPAVLEGELPGLHDKQGISEGPSKAVAEGSNNHAVNPSDEELQSTEHFSNSLPLSILHSSTNDDGQEPLVELSNPSDTDIDIPGNFD 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1462 352 PANTHER GATA TRANSCRIPTION FACTOR 28 3 345 IPR045280 GO:0006355
Bisa09g1462 352 MobiDBLite consensus disorder prediction 290 338 - -
Bisa09g1462 352 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 200 251 - -
Bisa09g1462 352 ProSiteProfiles GATA-type zinc finger domain profile. 199 257 IPR000679 GO:0006355|GO:0043565
Bisa09g1462 352 SMART GATA_3 199 252 IPR000679 GO:0006355|GO:0043565
Bisa09g1462 352 Pfam tify domain 69 100 IPR010399 -
Bisa09g1462 352 MobiDBLite consensus disorder prediction 245 352 - -
Bisa09g1462 352 Pfam GATA zinc finger 205 241 IPR000679 GO:0006355|GO:0043565
Bisa09g1462 352 ProSiteProfiles CCT domain profile. 134 176 IPR010402 GO:0005515
Bisa09g1462 352 SMART tify_2 66 101 IPR010399 -
Bisa09g1462 352 Pfam CCT motif 134 175 IPR010402 GO:0005515
Bisa09g1462 352 ProSitePatterns GATA-type zinc finger domain. 205 232 IPR000679 GO:0006355|GO:0043565
Bisa09g1462 352 MobiDBLite consensus disorder prediction 175 195 - -
Bisa09g1462 352 CDD ZnF_GATA 204 248 IPR000679 GO:0006355|GO:0043565
Bisa09g1462 352 MobiDBLite consensus disorder prediction 170 199 - -
Bisa09g1462 352 MobiDBLite consensus disorder prediction 1 43 - -
Bisa09g1462 352 Gene3D - 195 259 IPR013088 GO:0006355|GO:0008270
Bisa09g1462 352 ProSiteProfiles Tify domain profile. 66 101 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1462 Bisa-ChrBisa09 21276028 21295898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1462 28 248 Tify Gene Family AT1G51600 51.304 1.93e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa09g1462 CCT 1.3e-13 CL0281