Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1449 ATGGCGGGGCCTCAGGCCGAAGTTGACGGGCTGAAACAGAAGAGGAAGTTTCACATGGGAGAATTGCAGATAGGAAGAGAGAATGTTAGCAGGGAGAAGAAGCACTGGCGAGGCAAATATGTATCGCACCGTGTCTCACAGTACTGGGACGTTGTTTGGAGTGAAGCAGGCAGTACAGGAACAACAGGGATATTCGAGCGGATCGTCGGAACAAGCTTTCGGGTGATAGTGGAAACTGAGGATCAGGTGGAGATCTCATTTACGAGAATGTGGGATCCATCTCTCAAGGGAAAGCTTTCGCCGCTGAATATAGACAAAAGATACGTGATGCTTCGTGATTCCTCAGGCTTCTACTCATACGCCATTTTTGAACACCTGAAAGAGTGGCCTGCTTTCAACATACCCCAGATCAGGATCGTGTTCTCGCTACGAAAAGACAAGTATCATTACATGGCTGTAGCTGATAATAGGCAAAGATTCATGCCTCTTCCAGACGACAGATTACCTGGAAGAGGAAAAGAACTAGATCCCCCAGAAGCAGTTTTACTAGTCAATCCCGTGGAGCCAGAGTTCGAAGGAGAGGTGGATGACAAGTACCAGTACTCAAGCGAGAACAAAGATCTCAAGGTGCATGGGTGGATAAGCTCCGAGCCCGAAACTGCACCACCCATGGGCTTCTGGGTCATCATACCCAGCAATGAATTCCGTACAGGTGGACCAGTTAAACAGAACCTTACATCCCATGTGGGCCCCTTCAGCCTAGCCATGTTTTTGAGTGCTCATTATGCAGGGGAGGACATAGTTCTGAAACTCCAACCGAATGAGCCATGGAAGAAAGTTCTGGGGCCAGTGTTTGTGTATCTAAATACTTTGTTGGATGGTGAAGACACACTCTTGCTGTGGGAGGATGCCAAAGATCAGATGACGAAGCAAGTCCAAAGTTGGCCTTATGATTTTCCAGCTTCAGAGGACTTTCAGAAGTCTAGCCAACGAGGCACTGTTTGTGGCACATTACGAGTTCGAGACAGGGGCTTAAGTGGTGACTATATATCAGCACAAGGTGCATATGTAGGTCTTGCACCACCAGGAGATGCTGGATCATGGCAGAGAGAATGCAAGGGGTACCAATTCTGGACCAGAGCAAACGAGGAAGGCTACTTCTCAATTACTAATATACGTAGTGGGGATTATAATCTCTACGCTTGGGTTCCTGGTTTCATTGGAGAATATTGGAACAATGTTGTCCTCACCATCACCCCAGGTAGTGAAATAAATGTTGGTGACATTGTTTATGAGCCTCCAAGATCTGGTCCAACGTTATGGGAGATAGGCATTCCTGATCGCTCTGCTTCTGAATTCTATGTCCCTGATCCTAATCCAATGTACATCAACAAGCTTTATGTCAACCATCCAGACAAGTTTAGGCAGTATGGCTTGTGGGAAAGATATGCAGATCTATACCCAACGGAAGATTTGGTTTATACAATTGGTGTTAGTGACTATCGTAAAGATTGGTTTTTTGCACATGTCACCAGGAAGAAAGACGATGGGACTTTCCAAGGAACTACATGGCAAATTAAGTTCAAGCTTGACAATGTAATGGGAAGTGGAATCTATACACTGCGATTGGCGCTAGCATCTGCAAATGCAGTCGAATTACAGGTTAGAGTGAATGATCGAGAGCAAGACCCTCCTGTATTCACAAGTGGGAAGATTGGGAAGGACAACGCAATTTCTAGGCATGGAATCCATGGACTCTACTGGCTATTCAATGTCGACGTATCAGGTGGTCTTATGGTGGAAGGCGATAATACATTGTATCTCACACAGACTATAACCATTGGTCCTTTTATTAATGGGGTCATGTATGACTACATACGTCTAGAAAGTCCCCCATTGTCTAGCTCCATTTCACAATAG 1920 0.4573 MAGPQAEVDGLKQKRKFHMGELQIGRENVSREKKHWRGKYVSHRVSQYWDVVWSEAGSTGTTGIFERIVGTSFRVIVETEDQVEISFTRMWDPSLKGKLSPLNIDKRYVMLRDSSGFYSYAIFEHLKEWPAFNIPQIRIVFSLRKDKYHYMAVADNRQRFMPLPDDRLPGRGKELDPPEAVLLVNPVEPEFEGEVDDKYQYSSENKDLKVHGWISSEPETAPPMGFWVIIPSNEFRTGGPVKQNLTSHVGPFSLAMFLSAHYAGEDIVLKLQPNEPWKKVLGPVFVYLNTLLDGEDTLLLWEDAKDQMTKQVQSWPYDFPASEDFQKSSQRGTVCGTLRVRDRGLSGDYISAQGAYVGLAPPGDAGSWQRECKGYQFWTRANEEGYFSITNIRSGDYNLYAWVPGFIGEYWNNVVLTITPGSEINVGDIVYEPPRSGPTLWEIGIPDRSASEFYVPDPNPMYINKLYVNHPDKFRQYGLWERYADLYPTEDLVYTIGVSDYRKDWFFAHVTRKKDDGTFQGTTWQIKFKLDNVMGSGIYTLRLALASANAVELQVRVNDREQDPPVFTSGKIGKDNAISRHGIHGLYWLFNVDVSGGLMVEGDNTLYLTQTITIGPFINGVMYDYIRLESPPLSSSISQ 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1449 639 SUPERFAMILY Galactose-binding domain-like 436 629 IPR008979 -
Bisa09g1449 639 Pfam Polysaccharide lyase family 4, domain II 353 425 IPR029413 -
Bisa09g1449 639 SUPERFAMILY Starch-binding domain-like 328 429 IPR013784 GO:0030246
Bisa09g1449 639 FunFam Rhamnogalacturonate lyase B 327 426 - -
Bisa09g1449 639 Pfam Polysaccharide lyase family 4, domain III 439 628 IPR029411 -
Bisa09g1449 639 Gene3D - 436 629 - -
Bisa09g1449 639 CDD RGL4_M 330 429 IPR029413 -
Bisa09g1449 639 Pfam Rhamnogalacturonate lyase family 47 195 IPR010325 -
Bisa09g1449 639 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 46 632 - -
Bisa09g1449 639 Gene3D - 52 267 IPR014718 GO:0030246
Bisa09g1449 639 CDD RGL4_N 48 290 - -
Bisa09g1449 639 CDD RGL4_C 441 629 - -
Bisa09g1449 639 Gene3D - 327 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1449 Bisa-ChrBisa09 21014500 21023030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1449 48 631 Polysaccharide Lyase AT1G09890 65.128 0.0 794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1449 09 21014500 21023030 Bisa09g1449 09 21014500 21023030 ECH