Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1448 ATGAGGATGATCATCCTCACCAACTATTTCGTGCTCCTGTCGCTGACGTTCCTTTTGGTTCTGGGTTACGTTCCTTATCCAGGAGTGCGATTGGATATTCAAGATAAGCATGTGGTAATGGACAATGGCATAGTTCAGGTAACTTTATCAAATCCAGGAGGCTTAGTCACCGGAATCCAATACAATGGGATTGACAATCTGCTTGAAACTCTCAACAAGGAAATTGACAGAGGGTACTGGGATGTTGTATGGGACGAGGCTGGTAAAAAAGGGACAAAGGGTGTATTTGACAGAATGGAAGCCACGAATTTTACAGTAATTGTGGAAAATGAAGAACAAATAGAGTTATCTTTCACCAGAACGTGGCTCCCTGAACTCAAGGGAAAGCTTCCGCCTCTCAATATTGATAAAAGATTTGTAATGCTTCGTGGTTCATCCGGGTTCTACACCTACGCCATCTACGAGCATTTGAAGGAATGGCCTGCCTTCAATCTTGACAATACTAGAATTGCATTCAAGCTTCGGAAAGACAAGTTCCATTACATGGTTGTGGCGGACAACAGACAAAGATTCATGCCTCTGCCCGATGACCGGTCAAACGAAAGAGGACAAGCTCTAGCCTACCCAGAGGCTGTTCTTCTTGTGAATCCTGTGGAGCCCGAATTCAAAGGAGAGGTGGATGACAAGTACCAATACTCTTGCGAGAGTCGCAACAATAGGGTTCATGGGTGGATATGCATCCAGCCGTCTATTGGCTTTTGGCAAATTACACCCTCCTACGAGTTTCGATCTGCTGGTCCTCTCAAGCAATACCTTACTTCCCACGTGGGCCCCACCACCCTTTCTGTATTTCACAGCACGCATTATTCAGGAGCGGATCTGGTAATGAAATTTGGGCCCGATGAGCCGTGGAAGAAAGTCTATGGGCCCATATTTGTATACCTTAATTCTTTGTCAAATGGGGAAAGCCCGCTTAAGCTCTGGGAAGACGCTAAACAACAGATGGTCAATGAAATTGAGAGCTGGCCCTATGCATTTCCAGCTTCAGAAGACTTTCCCTCGTCTGCCCAACGGGGCAAGGTTAAGGGCAGATTACTCGTACGAGACAGGTATATCAGTGATGGGTACGTCCCAGCAAGTGGTGCTTATATAGGAGTAGCTGCCATAGGGAATGCTGGATCTTGGCAGAGAGAATGCAAGGGTTATCAATTTTGGACCATTACTGATGATAAAGGCTATTTCTCAATCATTGACATACGTGCTGGAGACTATAATCTTTACTCCTGGGTCACTGGATTTATTGGCGATTATCGATTTGACAATGTCATCAATATAACCTCAGGTTGTGAAGTTGATGTGGGGGAACTTGCTTATGAACCTCCAAGAGATGGCCCTACATTGTGGGAAATAGGCATCCCTGATCGCTCTGCAGCTGAATTCTATATCCCAGATCCTAATCCAAATTACATTAACAAGCTTTATGTCGATCATCCAGATAGGTATAGGCAATATGGATTGTGGGAGAGGTATGCAGAATTGTATCCAAATCAGGACTTGGTCTACACCATAGGCATCAGTGACTACAGAAAAGATTGGTTCTTTGCTCAGGTTACCAGGAAGAAAGATAATAACACATACCAAGGAACCACATGGCAGATTAATTTCGGACTTGATGATGTGAAAACGAATGGAACCTACAAGTTGCGATTGGCTCTGGCATCTGTACATGCTGCTGAGCTACAAGTTCGGATAAACAATTCAGAAGCAAACTCACCTTTGTTCACAAGTGGAGTGATTGGAAAGGAGAACACCATAGCCAGACATGGAATTCATGGGCTCTACTGGCTATTCAACGTTGATGTACAAGGCACTCTTCTTGTGCAGGGAAATAATACCATCTTTCTAACACAAGCATCAAGAACGAGTCCTTTTCAAGGGATTTTGTATGATTATATTCGCTTGGAAGGGCCCTCTTCTACATGA 1983 0.4428 MRMIILTNYFVLLSLTFLLVLGYVPYPGVRLDIQDKHVVMDNGIVQVTLSNPGGLVTGIQYNGIDNLLETLNKEIDRGYWDVVWDEAGKKGTKGVFDRMEATNFTVIVENEEQIELSFTRTWLPELKGKLPPLNIDKRFVMLRGSSGFYTYAIYEHLKEWPAFNLDNTRIAFKLRKDKFHYMVVADNRQRFMPLPDDRSNERGQALAYPEAVLLVNPVEPEFKGEVDDKYQYSCESRNNRVHGWICIQPSIGFWQITPSYEFRSAGPLKQYLTSHVGPTTLSVFHSTHYSGADLVMKFGPDEPWKKVYGPIFVYLNSLSNGESPLKLWEDAKQQMVNEIESWPYAFPASEDFPSSAQRGKVKGRLLVRDRYISDGYVPASGAYIGVAAIGNAGSWQRECKGYQFWTITDDKGYFSIIDIRAGDYNLYSWVTGFIGDYRFDNVINITSGCEVDVGELAYEPPRDGPTLWEIGIPDRSAAEFYIPDPNPNYINKLYVDHPDRYRQYGLWERYAELYPNQDLVYTIGISDYRKDWFFAQVTRKKDNNTYQGTTWQINFGLDDVKTNGTYKLRLALASVHAAELQVRINNSEANSPLFTSGVIGKENTIARHGIHGLYWLFNVDVQGTLLVQGNNTIFLTQASRTSPFQGILYDYIRLEGPSST 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1448 660 CDD RGL4_N 34 317 - -
Bisa09g1448 660 CDD RGL4_C 468 655 - -
Bisa09g1448 660 Pfam Polysaccharide lyase family 4, domain II 380 452 IPR029413 -
Bisa09g1448 660 CDD RGL4_M 357 456 IPR029413 -
Bisa09g1448 660 Gene3D - 30 304 IPR014718 GO:0030246
Bisa09g1448 660 FunFam Rhamnogalacturonate lyase B 354 453 - -
Bisa09g1448 660 Pfam Rhamnogalacturonate lyase family 32 226 IPR010325 -
Bisa09g1448 660 SUPERFAMILY Galactose-binding domain-like 463 655 IPR008979 -
Bisa09g1448 660 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 34 658 - -
Bisa09g1448 660 Gene3D - 464 655 - -
Bisa09g1448 660 Pfam Polysaccharide lyase family 4, domain III 466 654 IPR029411 -
Bisa09g1448 660 SUPERFAMILY Starch-binding domain-like 356 450 IPR013784 GO:0030246
Bisa09g1448 660 Gene3D - 354 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1448 Bisa-ChrBisa09 21009199 21013688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1448 29 658 Polysaccharide Lyase AT1G09890 67.981 0.0 904