Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1447 ATGGCGCAACTAGGAGTGCAACTAATTATTGAAGATAGCCATGTGGTGATGGACAATGGCATGCTAAGAGTAACCTTATCAAATCCTGAGGGAATAGTCACAGGAATAGAATATAATGGCATCGATAACTTGCTTGAAGTTCTGAATGAGGAATCTAATAGAGGGTATTGGGATCTAGTTTGGAGCTCTTCATCAAGTAGTGGGACCACTGGTAAATTTGATGTGATAAAGGGAACTAGTTTCAAAGTGATAGTGGAAACTGAGGAACAAGTTGAGTTATCCTTCACAAGAACGTGGGATGCCTCACTTGAGGGCGATCTGGTTCCCTTAAACATCGATAAAAGATTCATAATGTGTCGTGGTTCTTCTGGCTTCTACTCCTATGCTATTTATGAGCACTTACAGGACTGGCCTGCTTTCAATCTTGCCGAAACCAGAATTGCTTTTAAGCTCAGAAAAGACAAGTTTCATTATATGGCAATGGCAGATAATAGACAAAGAAACATGCCTCTTCCAGATGACAGATTAGCACCTAGAGGCCAAGCCCTTGCCTACCCTGAGGCAGTTCTGCTTGTTAATCCTGTTGAGCCAGAATTGAAAGGAGAGGTGGACGATAAGTACCAATATTCATGCGACAACAAGGACAGCAAGGTGCATGGATGGATCTGCATGGACCCAGCCGTGGGATTCTGGATGATAACACCAACCAACGAGTTCCGATCTGGTGGACCCCTCAAACAGAACTTAACTTCTCACGTCGGACCTACCACTCTTGCTGTGTTTCTAAGCGCTCATTATAGCGGGGAAGATCTGGTGCCAAAGTTCAAAGCTGGTGAGGCATGGAAGAAAGTTTTTGGTCCTGTTTTCATCTATTTGAATTCTCCCTATAATGGAGACGACCCACTTACTCTATGGGAAGACGCTAAACTTCAGATGTTGATAGAAGTTGAAAGCTGGCCCTACAATTTTCCTGCTTCACCAGATTACCTGAAGTGGGACGAACGTGGCAGTGTCAATGGCAGGCTACTTGTCCGAGACAGGTATATTAGCAATGACGATATCTCAGCAAAAGGTGCTTATGTTGGGTTGGCTCCACCAGGGGACGTTGGATCATGGCAAAGAGAATGCAAGAATTACCAGTTCTGGACTAAAGCAGACGATGATGGATATTTCTCCATCAGTAATATACGCCCTGGAGACTATAATCTTTACGCATGGGTCCCTGGTTTTATTGGCGATTATAGATATGATGTTGTTATCAACATAACTGAAGGTAGTGACATAGACATAGGTGATGTTGTATACGAGGCTCCAAGAGATGGTCCAACACTGTGGGAAATAGGAATCCCTGATCGCTCAGCTGCTGAGTTCTATGTTCCTGATCCCAATCCCAAATATATCAACAAACTCTATGTTAATCATCCTGACAAGTTTAGGCAGTATGGTTTATGGGAGAGATATGCAGAGATATACCCTGACTCTGACTTGGCTTACACAATTGGTGTTAGTGACTACACCAAAGATTGGTTCTTTGCTCAAGTCACCAGAAGGAAAGATGATAATACATATCAAGGAACCACATGGCAAATCAAGTTTAAACTGGACAGCGTAAAAAAGAGCAGCACTTATAAGCTAAGGTTAGCATTGGCATCAGCAACATTTTCTGAATTGCAGGTTCGAGTTAATGATCCAAAGGCATATCGTCCTATATTTTCAAGTGGATTGATAGGAAAAGATAACTCAATTGCAAGGCATGGCATTCATGGGCTGTATTGGGTTTACAGTGTGGACATTTCTGGTTCCCGGTTCGTGGTTGGAGATAACACCATCTTTTTGACACAGTCAAGAGGGAATAGTCCATTTCAGGGCATTATGTATGATTATATTCGTTTAGAAGCACCCCCATCATCTTAG 1914 0.4274 MAQLGVQLIIEDSHVVMDNGMLRVTLSNPEGIVTGIEYNGIDNLLEVLNEESNRGYWDLVWSSSSSSGTTGKFDVIKGTSFKVIVETEEQVELSFTRTWDASLEGDLVPLNIDKRFIMCRGSSGFYSYAIYEHLQDWPAFNLAETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRLAPRGQALAYPEAVLLVNPVEPELKGEVDDKYQYSCDNKDSKVHGWICMDPAVGFWMITPTNEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWKKVFGPVFIYLNSPYNGDDPLTLWEDAKLQMLIEVESWPYNFPASPDYLKWDERGSVNGRLLVRDRYISNDDISAKGAYVGLAPPGDVGSWQRECKNYQFWTKADDDGYFSISNIRPGDYNLYAWVPGFIGDYRYDVVINITEGSDIDIGDVVYEAPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKLYVNHPDKFRQYGLWERYAEIYPDSDLAYTIGVSDYTKDWFFAQVTRRKDDNTYQGTTWQIKFKLDSVKKSSTYKLRLALASATFSELQVRVNDPKAYRPIFSSGLIGKDNSIARHGIHGLYWVYSVDISGSRFVVGDNTIFLTQSRGNSPFQGIMYDYIRLEAPPSS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1447 637 SUPERFAMILY Galactose-binding domain-like 440 632 IPR008979 -
Bisa09g1447 637 CDD RGL4_M 334 432 IPR029413 -
Bisa09g1447 637 CDD RGL4_C 445 632 - -
Bisa09g1447 637 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 12 635 - -
Bisa09g1447 637 Pfam Rhamnogalacturonate lyase family 6 203 IPR010325 -
Bisa09g1447 637 SUPERFAMILY Galactose mutarotase-like 12 295 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bisa09g1447 637 Gene3D - 441 632 - -
Bisa09g1447 637 Gene3D - 7 304 IPR014718 GO:0030246
Bisa09g1447 637 Pfam Polysaccharide lyase family 4, domain II 357 429 IPR029413 -
Bisa09g1447 637 Gene3D - 333 430 - -
Bisa09g1447 637 FunFam Rhamnogalacturonate lyase B 331 430 - -
Bisa09g1447 637 SUPERFAMILY Starch-binding domain-like 333 429 IPR013784 GO:0030246
Bisa09g1447 637 CDD RGL4_N 11 304 - -
Bisa09g1447 637 Pfam Polysaccharide lyase family 4, domain III 443 631 IPR029411 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1447 Bisa-ChrBisa09 20997939 21006147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1447 1 634 Polysaccharide Lyase AT1G09890 71.855 0.0 961