Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1435 ATGGAACTCTGTGAACATGATCATTTCTTGGAAGAATTACTTGCTCTGAAAAGGGAAACATGGGACACCATCCCATCAGAAGAAAATCATCTCTGCGCCAATTCATGGGGTTTTGATTGTGTTGATCAAAACTCTATGCCTTTTCTTCCTAATTCTTCTTATTCCTGTCATGAAATTCCTCAAAGTTACGACAACAACAGCTATGCCTTCAATGAAATCTATGGTTCCTTACTTGATAAATGCTCTCCTCCCCAGATTAACGATTCATCTTCCTCATCCTACAACGTTCTCGATACTCCATTTCTGGGTCAAGAAGATTACCCATTTCTGGGTCAAGAAGATTTGGAGGATCCTGGCCTCCTTGGGGAAGAGCTTCAGAGTCTGGAACTGCAAAACCCATGTAAGACAGAGCCAAGCCAATCCCCTGAAATGCCAGCTTTCAACATGGGAGGTACCTCTTTGGAAACGAAGAATCGCGCAAAGAAGCTTCAGGGCCAGCCCTCCAAGAATCTAATGGCTGAGAGGAGGAGAAGAAAGAGACTAAACGATCGCCTTTCGATGCTTAGATCAATCGTCCCCAAGATAAGCAAGATGGACAGAACATCTATACTTGGAGACACCATAGATTACATGAAAGAACTCCTGGAGAAGATCAGCAAATTGCAGCAAGAAGTAGAGGTAGTAGATTCAAATATGATGGGCATTTTCAGGGAGTCAAATCAAAATGAAATCCTAGTGAGAAATTCACCCAAGTTTGATGTGGAGAGGAGGAATGTGAGCACACAGGTTGAAATTTGCTGCGCTGGAAAGCCAGGGTTGTTGCAATCCACAGTGAACACCTTGGAAGCATTAGGTCTTGAGATTCAACAGTGTGTTATAAGTTGTTTCAATGATTTCACATTGCAGGCTTCTTGCTCAGAGGAATTGGAGCAGAGGACAATACTGAGTTCGCAAGATATAAAACAAGCCTTATTCAGAAGCGCAGGATATGGAGGAAGATGTTTGTAA 1008 0.4266 MELCEHDHFLEELLALKRETWDTIPSEENHLCANSWGFDCVDQNSMPFLPNSSYSCHEIPQSYDNNSYAFNEIYGSLLDKCSPPQINDSSSSSYNVLDTPFLGQEDYPFLGQEDLEDPGLLGEELQSLELQNPCKTEPSQSPEMPAFNMGGTSLETKNRAKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKISKLQQEVEVVDSNMMGIFRESNQNEILVRNSPKFDVERRNVSTQVEICCAGKPGLLQSTVNTLEALGLEIQQCVISCFNDFTLQASCSEELEQRTILSSQDIKQALFRSAGYGGRCL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1435 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 214 IPR011598 GO:0046983
Bisa09g1435 335 CDD ACT_UUR-ACR-like 261 324 - -
Bisa09g1435 335 Pfam Helix-loop-helix DNA-binding domain 171 214 IPR011598 GO:0046983
Bisa09g1435 335 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 71 329 - -
Bisa09g1435 335 Gene3D - 156 231 IPR036638 GO:0046983
Bisa09g1435 335 Coils Coil 211 231 - -
Bisa09g1435 335 SMART finulus 171 220 IPR011598 GO:0046983
Bisa09g1435 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 234 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1435 Bisa-ChrBisa09 20725573 20726833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1435 27 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 48.742 4.00e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa09g1435 HLH 7.1e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1435 09 20725573 20726833 Bisa09g1435 09 20725573 20726833 ECH