Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1432 ATGCGCTTCTCTGAGAGTTTGGTTCGCGCCTTTTTTTTGAAACCTTCGTTCCCAATCATATTCCACCCTTTTGTGATTACACTAATAGCTGTTCATGCATCAATTGGTTTAGCTCAATTTTTTGTTTGCCGACTTGAAGGAGTAGGGAAGGAGGAAGGTCAAAGCAATGCCACTTTATTGGCTTCCTCAGCCACCGTAGAGAGTGTTTTCCCTAACAACACCAAATTAAAAGAAGACAACTACATGGGATTATCGGATTGTTCTTCAGTGGACAGCTCAGCTCCGTCCTTCTCGGACGAGAGTAAGCTGAACCTTAAAGCTACAGAGCTGAGACTTGGTCTTCCAGGATCTCAGTCTCCTGAAAGACAAGACTCAGATGATCTTTGCCTAAGAAGTTCAAGTTCAATACAATTTGATGAGAAACCTCTGTTTCCTTTGCGTCCTTCAAACGATGATCACTACGCCTCGTCAAAGACAGTTGTGGTCGGTAACAAAAGAGGGTTTTCAGATGCTATGAATGGGTTCTCCGAGGGGAAATTCCTAGTAAATTCAGAGATGACTAAAATGTTGTCACCAAAAAGCTGTTCTGTGATTGACAAAGCAAAAGAAGTAGCATCATCAACAAAGGAGGAACGTGAGAGGCCTGATGTTGTGAATGAAATCAGACCAGATCTTGATGGCTCCACGAATAATAATAGCAGTGCACCGGCTGCTAAGGCACAGGTTGTGGGTTGGCCTCCTATAAGATCATTTAGGAAAAATTCACTGACTTCTACTGCGAAGAACACCAAGGGAGTAGATGGAAAAGCACTGTTCATCAAGGTCAGTATGGACGGTGCTCCATATTTGAGGAAAGTGGACTTGAAGAATTATTGTTCATATCCAGAGCTATCTTCTTCTCTGGAGAAGATGTTCAGTTGTTTTACTATAGGTCAATGTGGATCTCATGTAAGTCTGGGTGGGGAGATGGTGAATGAAAGCAAGATGAAGGATCTGCTTCATGGGTCCGAATATGTTCTTACATATGAGGACAAAGATGGTGATTGGATGCTTGTGGGTGATGTTCCCTGGGAGATGTTCATTGAAACTTGCAGGAGGATGAGGATCATGAAGAGTTCTGATGCCATTGGTTTAGCTCCCAGGGCAGGGGAAAAAAGTAAGAGCAGGAACTAG 1173 0.4322 MRFSESLVRAFFLKPSFPIIFHPFVITLIAVHASIGLAQFFVCRLEGVGKEEGQSNATLLASSATVESVFPNNTKLKEDNYMGLSDCSSVDSSAPSFSDESKLNLKATELRLGLPGSQSPERQDSDDLCLRSSSSIQFDEKPLFPLRPSNDDHYASSKTVVVGNKRGFSDAMNGFSEGKFLVNSEMTKMLSPKSCSVIDKAKEVASSTKEERERPDVVNEIRPDLDGSTNNNSSAPAAKAQVVGWPPIRSFRKNSLTSTAKNTKGVDGKALFIKVSMDGAPYLRKVDLKNYCSYPELSSSLEKMFSCFTIGQCGSHVSLGGEMVNESKMKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCRRMRIMKSSDAIGLAPRAGEKSKSRN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1432 390 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 102 377 IPR003311 GO:0005634|GO:0006355
Bisa09g1432 390 SUPERFAMILY CAD & PB1 domains 267 371 - -
Bisa09g1432 390 Gene3D - 265 384 - -
Bisa09g1432 390 FunFam Auxin-responsive protein 266 382 - -
Bisa09g1432 390 ProSiteProfiles PB1 domain profile. 270 372 IPR000270 GO:0005515
Bisa09g1432 390 Pfam AUX/IAA family 108 381 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1432 Bisa-ChrBisa09 20700370 20702887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1432 273 375 B3 DNA Binding Superfamily AT2G46530 33.010 1.65e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa09g1432 AUX_IAA 8.6e-88 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1432 09 20700370 20702887 Bisa09g1432 09 20700370 20702887 ECH