Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1421 ATGTCTCATTCCTTTCGTGCACCACCTTCCGACATGCTCTTCTCTCTCTGCTACGTCATCTGTTTCATCTCTTTACTTTCCGGGGTCGTTGAGTCCGACGACCGGAAGCTTCTTCTCGACCTGAAATCCGCACTCGAGAAGTCAAATTCCTTTGTGTTTGATTCATGGAACGACACCAATTCTGTGTGCCGTTTCAATGGGATTACTTGTGATTCCCGCGGTTTAGTGACCGAAATTGAGCTTTCGAATCAGAAGCTATCTGGGGTTCTTCCTCTTGAATCCATTTGCCAGCTTCAATCTCTCGAGAAGCTCTCACTTGGGTTGAACTCTCTGTATGGGAAAATCGCAGAGGATTTGAGAAACTGTGTCAAGTTAAGATATTTAGATTTGGGAAACAACCATTTCTCGGGATCATTTCCGGATATATCTCCTCTAAGAAATTTGCAGTATCTGTATCTGAATCAAAGTGGATTTTCTGGGACTTTTCCATGGAAAGCCTTACTTAACATCACGGGTCTCGTGCAATTAAGCGTTGGAGATAACCCTTTTGATCGTACTCTTTTTCCATCAGAGATAGTGAAACTCAAGAACCTCAATTGGCTCTATCTAGCGAATTGCAGCATCGAAGGGAATATTCCGGCTGGGATAGGTAACCTCACGGAGCTTATAAATTTTGAGATTTCAGACAACTTCATCTCCGGCGAGATTCCGACGGAGATTGGGAAGCTTCAGAGACTATGGCAGTTTGAGTTCTACAACAACAGAATCACTGGGAAATTTCCAATGGAGTTTCGAAATCTCACAAGCCTCGAGAAGTTAGATGGGTCCATGAACCTTCTCGAAGGTGATCTCTCGGAGTTGAGGTTCTTGACGAATCTGGTTACTCTGCAATTATTTCAAAACAAATTTTCAGGGGAAATTCCAGCAGAGTTCGGTGAATTCAAAAAACTCGTGAATATCTCTTTATACACTAACAACTTTTCAGGACCTATTCCTCAAAAGATTGGATCTTGGGCAGAGTTTGATTACATCGACGTGTCTGAGAACATGTTGACGGGTCCTATTCCGCCAGATATGTGCAAGAACGGGAAGATGCATGGCCTGCTCGTGCTTCAGAACAAGCTCACCGGAGAAGTACCAGACACTTATGTGAACTGTAAGACTATAAGACGATTCAGAGTCAGCAACAACTTGCTTTCTGGTGTTATTCCTTCTGGAATATGGGGATTGCCGAATGCGGACATAATCGATATTGAATCGAATCAACTGGAAGGTTCGGTTACGTCAGAAATTAAGAACGCGAAGAAGCTGGCTCAGATATATGCGAGAAAGAATCGGTTGGCCGGTGAGATACCCGAAGAAATCTCAGAAACGACATCGCTGGTGAGAATTGATTTGAGTGAAAATCAAATTTCTGGGGAAATCCCGGTGGGTATTGGAGAGCTCAAACAATTAAGCAGTCTTCATTTGCAAAGTAATAAACTATCTGGGTCGATACCAGATTCTTTGGGTTTATGTAATTCCCTTACCGACATCGAACTGGCCAAGAATTTTCTCTCTGGGAAGATCCCTTCATCATTGGGTCACTTGCCTACTCTGAATTCTTTGAATTTGTCCCAGAACCAACTCTCCGGTCAAATTCCGGCGAGTTTCGCACTCCTCCGGCTGAGTCTCTTCGATCTATCGTATAACCGATTAACGGGTCCAATCCCAGAATCTCCTTCCATTAAAGCTAATAATGGAAGCCTCGATGGAAACCCAGGACTCTGCAGCCTGTTCGACGCGAATAGCGATTTCAAGCCCTGTTCTGCTACTTCCTCTGGCATCTCCAGAGGCGTCCGTACACTCATAATCTGCTTCGCAATAGCTTCAATCATGCTTCTCGCTTGTCTGGCTCTTTACTTGCAGCTGAAGAAGAAGGGCAAATATCGAGAACGGTCTTTAAAGGAAGAATCCTGGGACGTGAAATCCTTCCACATGCTGAGTTTCACAGAGGACGAGATTCTAGATTCCATCAAGTCAGAGAATGTAATAGGAAAAGGAGGATCCGGAAACGTGTACAGGGCCCTACTCTCTAATGGCAATGAACTCGCCGTGAAGCACATAAGGAACACGGGCTCCGTTGGCCGGAAAAGAAGCTGGAGTAGCACTCCGATGATGGGGAAAAAGTCAAAGGAATTCGATGCGGAGGTGCGGACTCTGAGCTCCATAAGGCACGTGAACGTGGTGAAGCTATATTGCAGCATCACAAGCGAAGATTCCAGCTTGCTGGTGTATGAGTATCTTCCAAATGGAAGCTTGTGGGATCGGCTTCACACGAGTGGGAAAGTGGAAGTAGAGCTGGGTTGGGAAAAAAGATATGAAATTGCAGTAGGAGCAGCTAAGGGATTGGAGTATTTACATCATGGGTGTGAAAAGCCTGTGATTCACAGGGACGTCAAGTCCAGCAACATTTTGTTGGATGAGTTGTTGAAGCCTAGGATTGCTGATTTCGGACTCGCTAAGATTCTTCATGTTCATCCCAATAATGATCAGGATTCCACTCGTGTCATTGCAGGAACACATGGGTATATTGCTCCTGAGTATGGGTACACATACAAAGTGAACGAGAAAAGTGATGTGTACAGCTTTGGGGTGGTACTAATGGAGCTGGTGACAGGGAAGAGGCCAATAGAGGCAGAATATGGAGAGAACAGAGACATAGTCAGCTGGGTGTGCAGCAAGTTGCAGAGCAAAGAGAGCGTGATGAGAATGGTGGATTCCAGAATTCCAGAAATGTATAAAGAGGAGGCTGTGAAGATGTTGAGAACAGCCATTCTGTGTACTGCAAGGCTTCCAGCTTTGAGGCCCACCATGAGAAGTGTGGTTCAGATGCTTGAGCACGCTGAGCCTTGTAAATTGGTTGGAATCGTCATCACCAAAGACGACACCAAAAAGAAAGAGGGCCACAAGAGTTCCATATAG 2964 0.4511 MSHSFRAPPSDMLFSLCYVICFISLLSGVVESDDRKLLLDLKSALEKSNSFVFDSWNDTNSVCRFNGITCDSRGLVTEIELSNQKLSGVLPLESICQLQSLEKLSLGLNSLYGKIAEDLRNCVKLRYLDLGNNHFSGSFPDISPLRNLQYLYLNQSGFSGTFPWKALLNITGLVQLSVGDNPFDRTLFPSEIVKLKNLNWLYLANCSIEGNIPAGIGNLTELINFEISDNFISGEIPTEIGKLQRLWQFEFYNNRITGKFPMEFRNLTSLEKLDGSMNLLEGDLSELRFLTNLVTLQLFQNKFSGEIPAEFGEFKKLVNISLYTNNFSGPIPQKIGSWAEFDYIDVSENMLTGPIPPDMCKNGKMHGLLVLQNKLTGEVPDTYVNCKTIRRFRVSNNLLSGVIPSGIWGLPNADIIDIESNQLEGSVTSEIKNAKKLAQIYARKNRLAGEIPEEISETTSLVRIDLSENQISGEIPVGIGELKQLSSLHLQSNKLSGSIPDSLGLCNSLTDIELAKNFLSGKIPSSLGHLPTLNSLNLSQNQLSGQIPASFALLRLSLFDLSYNRLTGPIPESPSIKANNGSLDGNPGLCSLFDANSDFKPCSATSSGISRGVRTLIICFAIASIMLLACLALYLQLKKKGKYRERSLKEESWDVKSFHMLSFTEDEILDSIKSENVIGKGGSGNVYRALLSNGNELAVKHIRNTGSVGRKRSWSSTPMMGKKSKEFDAEVRTLSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTSGKVEVELGWEKRYEIAVGAAKGLEYLHHGCEKPVIHRDVKSSNILLDELLKPRIADFGLAKILHVHPNNDQDSTRVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEAEYGENRDIVSWVCSKLQSKESVMRMVDSRIPEMYKEEAVKMLRTAILCTARLPALRPTMRSVVQMLEHAEPCKLVGIVITKDDTKKKEGHKSSI 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1421 987 SUPERFAMILY L domain-like 278 596 - -
Bisa09g1421 987 SUPERFAMILY L domain-like 70 332 - -
Bisa09g1421 987 ProSitePatterns Protein kinases ATP-binding region signature. 678 700 IPR017441 GO:0005524
Bisa09g1421 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Bisa09g1421 987 FunFam Leucine-rich receptor-like protein kinase family protein 190 286 - -
Bisa09g1421 987 SUPERFAMILY Protein kinase-like (PK-like) 663 960 IPR011009 -
Bisa09g1421 987 Gene3D Phosphorylase Kinase; domain 1 655 761 - -
Bisa09g1421 987 FunFam Probable inactive receptor kinase RLK902 31 189 - -
Bisa09g1421 987 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 762 975 - -
Bisa09g1421 987 FunFam Leucine-rich repeat receptor-like protein kinase TDR 287 604 - -
Bisa09g1421 987 Gene3D Ribonuclease Inhibitor 187 288 IPR032675 -
Bisa09g1421 987 ProSiteProfiles Protein kinase domain profile. 672 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1421 987 SMART serkin_6 672 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1421 987 ProSiteProfiles Leucine-rich repeat profile. 124 146 IPR001611 GO:0005515
Bisa09g1421 987 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Bisa09g1421 987 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 28 959 - -
Bisa09g1421 987 Gene3D Transferase(Phosphotransferase) domain 1 762 975 - -
Bisa09g1421 987 FunFam Receptor-like protein kinase HAIKU2 655 761 - -
Bisa09g1421 987 Gene3D Ribonuclease Inhibitor 289 359 IPR032675 -
Bisa09g1421 987 Pfam Protein kinase domain 674 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1421 987 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Bisa09g1421 987 Gene3D Ribonuclease Inhibitor 360 608 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1421 Bisa-ChrBisa09 20477945 20481116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1421 26 981 Receptor kinase-like Gene Family AT1G09970 62.487 0.0 1172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa09g1421 Pkinase 7.6e-44 CL0016