Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1420 ATGGATCGTCAAATAATTCTCTTTCTTCTTGTTATTACGATGTCTTGCCTTCCACAAGTCATCAGTTTCAGTGCCAATACCAATCAGTCTCAGTTTTTTGCTCTGATGAAGCAGTCTTTCTCCGGGAACTACCCTTCTGATTGGGAAGTACAAAAACCTGTCTGCAACTTCACCGGGGTTGCATGCAACAACCAAGGAGACGTCATCAACCTTGATATCTCCGGTTTGTCACTTTCCGGTGACTTTCCTCCACATATATGCTCTTACATGCCAGAGCTACGTGTCCTGCGTGTCAGCGAGAATCGCTTCAGGGGAGGCTTCCCAGACACCATAGTCAACTGTTCACACTTGGAAGAGCTTAACATGAGCAACATGTATCATGTTGGGACACTTCCAGATTTCTCACCCATGACATCTCTCAAGATTCTTGATCTGTCATACAACCTCTTCACTGGTCGCTTCCCTTTGTCCGTGTTTAACCTCACCAATCTTGAGGTGCTTAACTTCAACGAAAATAGCGGTTTCAACTTGTGGAAGCTGCCAGAGGATGTATACAGGCTCAAAAATCTTCAGTCCATGGTGTTGACAACATGCATGGTGCAAGGCCAAATCCCATCATCCATAGGGAACCTCACGTCTCTTGTTGATCTTGAATTGAGTGGGAATTTCCTCACTGGTCATATTCCTGCAGAGATTGGAAAGCTGAAAAATTTGCAGCAGCTTGAGCTTTACTATAACGAACTTGTCGGGATAATACCTGAGGAGCTAGGAAATCTGAAGGAGCTCGTAGACTTGGATATGTCAGTCAATAAGTTGACTGGAAATATCCCAGATTCTCTATGTCGCCTTCCCAAGCTTGGAGTCATGCAGCTTTACAACAACAGCCTTACAGGGGAAATCCCAGCTGTGATAGCAAACTCAACATCCTTGAGAATGTTATCTCTTTATGATAATTTCCTGAGCGGTCTTGTTCCTGAAAATCTTGGTCAGTTCTCAGAGATGGTGGTTTTTGACTTGTCTGAAAACCAACTATCTGGTCCATTGCCAGCAGAGGTTTGCAAGAGAGGTAAATTGCTCTACTTTCTTGTTCTGAATAATCAGTTTTCTGGGAAAATACCAGACAATTATGCAAAATGCTTGACACTTTTGAGGTTCAGAGTGAGTAACAACCACTTGGAGGGCTTTATTCCCAGTGGACTGTTTGGCTTGCCTCAAGTTTCCATTATTGATTTGTCTTACAATAATTTTTCTGGTCCAATTTCTGAGACCATTGGACGTTCCACAAACTTGTCAGAGCTTTTCCTACAGAGGAACCAATTTTCAGGATTCATACCTCATACGATCCATGGGGCCTCTAACTTGGTCAAGATTGATCTCAGTAACAACCTTCTGTCTGGTCCAATACCAAACGAAATTGGCAGCCTCAAAAGGCTTAATTTCCTTGTGTTGCAAGGGAACAAGTTAAATTCTTCTATCCCCTCTTCACTTTCCTCATTGGAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTCTTGACTGGAAGCATCCCAGAGAGTTTCTCTGCACTTTTACCTAACTCTATCAACTTCTCAAACAATTTGCTTTCTGGTCCAATTCCTTCCTCGCTGATAAACTCAGGGCTAGAAGAAAGCTTTTCAGGGAATCCTGGTCTCTGTGTGTTGCCAGTTTCTGCTAAATTATCAGATCAGAATTTCCCTGTTTGTTCACAGACTAACAGAAAGAGGTTGAATACCATCTGGGTAGCTGTGATTTCAGCAGCTTTAATCATCATTGGATTAGGAGCTGTTCTGTTTCTGAAACGCAAGCCTGCCAAAGAGAAGGCTGCTTTGGAACAAGATGAAGAAACATTAACTTCGTCATTCTTCTCTTATGACTTGAAGAGTTTTCACAGGTTAACTTATGACCAGCAGGAGATCATTGAGGCCATGGTGGATAAGAACATCGTGGGGTATGGTGGATCTGGCACGGTGTACAAGATTGAGTTGAAAAGCGGTGAACATGTTGCGGTCAAGAGGCTGTGGAGTCGAACATCAAAGGACTCGGCTCTCGAGGATCGAAAGGTTTTGGACAAGGAGTTGAAGACTGAGGTTGGGACCTTGGGAAGTTTAAGACACAAGAACATAATCAAACTGTGCAGTTACTTCTCCAGCTTTGACTGCAGCTTGCTGGTTTATGAGTACATGCCAAATGGTAATCTCTGGGATGCCCTGCACAAAGGTTGGATCCATTTGAATTGGCCCACTCGCCATCAAATTGCACTGGGGATTGCACAGGGTTTGGCATACCTCCACCATGATTTGCTTCCTCCAATTGTTCATAGAGACATCAAGTCAACTAACATCCTTCTGGATGTTAATTATCGGCCTAAGGTTGCAGATTTTGGGATCGCCAAGGTATTACAAGCAAGGGGAGGGAAAGATTCCTCAACAACAGTCATTGCAGGAACCTACGGTTACTTAGCCCCAGAATATGCATATACCTCTAGAGCGACAACCAAGTGTGATGTGTACAGTTTTGGGGTTATTCTGATGGAACTAATAACTGGGAAGAAGCCTGTGGAGGTAGAATTTGGAGAGAACAAGAACATTGTGTATTGGGTTTCAAACAAAGTAGAAAGCATGGAAGGGGTTAATGAAATAATAGATAAGAGATTATCAGGGTCATTCAGAGAGGAAATTATTCAAGTGATCCGAATTGCCATTCGTTGCACCTACAAAGCCCCAGCTAATCGACCAACCATGAAAGAGGTTGTTCAGCAACTGATTGAGGCAGACCCATGCAAATTCGATTGA 2814 0.4335 MDRQIILFLLVITMSCLPQVISFSANTNQSQFFALMKQSFSGNYPSDWEVQKPVCNFTGVACNNQGDVINLDISGLSLSGDFPPHICSYMPELRVLRVSENRFRGGFPDTIVNCSHLEELNMSNMYHVGTLPDFSPMTSLKILDLSYNLFTGRFPLSVFNLTNLEVLNFNENSGFNLWKLPEDVYRLKNLQSMVLTTCMVQGQIPSSIGNLTSLVDLELSGNFLTGHIPAEIGKLKNLQQLELYYNELVGIIPEELGNLKELVDLDMSVNKLTGNIPDSLCRLPKLGVMQLYNNSLTGEIPAVIANSTSLRMLSLYDNFLSGLVPENLGQFSEMVVFDLSENQLSGPLPAEVCKRGKLLYFLVLNNQFSGKIPDNYAKCLTLLRFRVSNNHLEGFIPSGLFGLPQVSIIDLSYNNFSGPISETIGRSTNLSELFLQRNQFSGFIPHTIHGASNLVKIDLSNNLLSGPIPNEIGSLKRLNFLVLQGNKLNSSIPSSLSSLESLNVLDLSNNLLTGSIPESFSALLPNSINFSNNLLSGPIPSSLINSGLEESFSGNPGLCVLPVSAKLSDQNFPVCSQTNRKRLNTIWVAVISAALIIIGLGAVLFLKRKPAKEKAALEQDEETLTSSFFSYDLKSFHRLTYDQQEIIEAMVDKNIVGYGGSGTVYKIELKSGEHVAVKRLWSRTSKDSALEDRKVLDKELKTEVGTLGSLRHKNIIKLCSYFSSFDCSLLVYEYMPNGNLWDALHKGWIHLNWPTRHQIALGIAQGLAYLHHDLLPPIVHRDIKSTNILLDVNYRPKVADFGIAKVLQARGGKDSSTTVIAGTYGYLAPEYAYTSRATTKCDVYSFGVILMELITGKKPVEVEFGENKNIVYWVSNKVESMEGVNEIIDKRLSGSFREEIIQVIRIAIRCTYKAPANRPTMKEVVQQLIEADPCKFD 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1420 937 FunFam receptor protein-tyrosine kinase CEPR1 633 734 - -
Bisa09g1420 937 Gene3D Ribonuclease Inhibitor 180 279 IPR032675 -
Bisa09g1420 937 Pfam Protein kinase domain 652 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1420 937 SUPERFAMILY Protein kinase-like (PK-like) 641 928 IPR011009 -
Bisa09g1420 937 ProSiteProfiles Protein kinase domain profile. 650 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1420 937 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Bisa09g1420 937 ProSitePatterns Protein kinases ATP-binding region signature. 656 678 IPR017441 GO:0005524
Bisa09g1420 937 SMART LRR_typ_2 161 187 IPR003591 -
Bisa09g1420 937 SMART LRR_typ_2 475 498 IPR003591 -
Bisa09g1420 937 SMART LRR_typ_2 259 283 IPR003591 -
Bisa09g1420 937 SMART LRR_typ_2 90 114 IPR003591 -
Bisa09g1420 937 SMART LRR_typ_2 499 522 IPR003591 -
Bisa09g1420 937 SMART LRR_typ_2 211 235 IPR003591 -
Bisa09g1420 937 Gene3D Ribonuclease Inhibitor 291 570 IPR032675 -
Bisa09g1420 937 Gene3D Phosphorylase Kinase; domain 1 633 734 - -
Bisa09g1420 937 Pfam Leucine rich repeat 213 272 IPR001611 GO:0005515
Bisa09g1420 937 Pfam Leucine rich repeat 428 488 IPR001611 GO:0005515
Bisa09g1420 937 FunFam Receptor protein-tyrosine kinase CEPR1 283 569 - -
Bisa09g1420 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Bisa09g1420 937 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 208 - -
Bisa09g1420 937 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 27 177 - -
Bisa09g1420 937 Gene3D Transferase(Phosphotransferase) domain 1 735 934 - -
Bisa09g1420 937 SMART serkin_6 650 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1420 937 FunFam leucine-rich repeat receptor-like protein kinase TDR 735 936 - -
Bisa09g1420 937 SUPERFAMILY L domain-like 45 349 - -
Bisa09g1420 937 Gene3D Ribonuclease Inhibitor 28 179 IPR032675 -
Bisa09g1420 937 SUPERFAMILY L domain-like 252 564 - -
Bisa09g1420 937 FunFam Leucine-rich repeat receptor-like protein kinase 178 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1420 Bisa-ChrBisa09 20459000 20462300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1420 25 933 Receptor kinase-like Gene Family AT5G49660 65.502 0.0 1216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa09g1420 Pkinase 4.4e-47 CL0016